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Models for chromatid interference with applications to recombination data.

机译:染色单体干扰模型与重组数据的应用。

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摘要

Genetic interference means that the occurrence of one crossover affects the occurrence and/or location of other crossovers in its neighborhood. Of the three components of genetic interference, two are well modeled: the distribution of the number and the locations of chiasmata. For the third component, chromatid interference, there exists only one model. Its application to real data has not yet been published. A further, new model for chromatid interference is presented here. In contrast to the existing model, it is assumed that chromatid interference acts only in the neighborhood of a chiasma. The appropriateness of this model is demonstrated by its application to three sets of recombination data. Both models for chromatid interference increased fit significantly compared to assuming no chromatid interference, at least for parts of the chromosomes. Interference does not necessarily act homogeneously. After extending both models to allow for heterogeneity of chromatid interference, a further improvement in fit was achieved.
机译:遗传干扰意味着一个交叉的发生会影响附近其他交叉的发生和/或位置。在遗传干扰的三个组成部分中,有两个被很好地建模:Chiasmata的数量分布和位置。对于第三部分,染色单体干涉,仅存在一个模型。它对实际数据的应用尚未发布。这里介绍了另一种用于染色单体干扰的新模型。与现有模型相反,假定染色单体干涉仅在chi骨附近起作用。该模型在三组重组数据中的应用证明了其适用性。与假设无染色单体干扰相比,至少对于部分染色体而言,这两种染色单体干扰模型均显着提高了拟合度。干扰不一定是同质的。扩展两个模型以允许染色单体干扰的异质性后,拟合度进一步提高。

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