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Sequence-Dependent Gene Conversion: Can Duplicated Genes Diverge Fast Enough to Escape Conversion?

机译:依赖序列的基因转换:重复的基因能快速扩散到逃逸转换吗?

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摘要

Conversion between duplicated genes limits their independent evolution. Models in which conversion frequencies decrease as genes diverge are examined to determine conditions underwhich genes can "escape" further conversion and hence escape from a gene family. A review of results from various recombination systems suggests two classes of sequence-dependence models: (1) the "k-hit" model in which conversion is completely inactivated by a few (k) mutational events, such as the insertion of a mobile element, and (2) more general models where conversion frequency gradually declines as genes diverge through the accumulation of point mutants. Exact analysis of the k-hit model is given and an approximate analysis of a more general sequence-dependent model is developed and verified by computer simulation. If µ is the per nucleotide mutation rate, then neutral duplicated genes diverging through point mutants are likely to escape conversion provided 2µ/λ >> 0.1, where λ is the conversion rate between identical genes. If 2µ/λ << 0.1, the expected number of conversions before escape increases exponentially so that, for biological purposes, the genes never escape conversion. For single mutational events sufficient to block further conversions, occurring at rate ν per copy per generation, many conversions are expected if 2ν/λ << 1, while the genes essentially evolve independently if 2ν/λ >> 1. Implications of these results for both models of concerted evolution and the evolution of new gene functions via gene duplication are discussed.
机译:复制基因之间的转换限制了它们的独立进化。检查其中转换频率随基因发散而降低的模型,以确定条件,在该条件下基因可以“逃逸”进一步的转化并因此逃离基因家族。对来自各种重组系统的结果的综述提出了两类序列依赖性模型:(1)“ k-hit”模型,其中的转化由于一些(k)突变事件而完全失活,例如插入一个可移动元件(2)更通用的模型,其中随着基因通过点突变体的积累而发生分化,转化频率逐渐降低。给出了k-hit模型的精确分析,并开发了更通用的序列依赖性模型的近似分析,并通过计算机仿真进行了验证。如果µ是每个核苷酸的突变率,则通过点突变体扩散的中性重复基因很可能会逃避转化,前提是2µ /λ 0.1,其中λ是同一基因之间的转化率。如果2μ/λ 0.1,则逃逸前的预期转化数将成倍增加,因此出于生物学目的,基因永远不会逃避转化。对于足以阻止进一步转化的单个突变事件(以每代每一代ν的速率发生),如果2ν/λ 1,则有望实现许多转化,而如果2ν/λ 1,则这些基因本质上是独立进化的。讨论了协同进化的模型和通过基因复制的新基因功能的进化。

著录项

  • 期刊名称 Genetics
  • 作者

    J. Bruce Walsh;

  • 作者单位
  • 年(卷),期 1987(117),3
  • 年度 1987
  • 页码 543–557
  • 总页数 15
  • 原文格式 PDF
  • 正文语种
  • 中图分类 遗传学;
  • 关键词

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