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Survey of Biosynthetic Gene Clusters from Sequenced Myxobacteria Reveals Unexplored Biosynthetic Potential

机译:测序的粘细菌的生物合成基因簇的调查显示未开发的生物合成潜力。

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摘要

Coinciding with the increase in sequenced bacteria, mining of bacterial genomes for biosynthetic gene clusters (BGCs) has become a critical component of natural product discovery. The order Myxococcales, a reputable source of biologically active secondary metabolites, spans three suborders which all include natural product producing representatives. Utilizing the BiG-SCAPE-CORASON platform to generate a sequence similarity network that contains 994 BGCs from 36 sequenced myxobacteria deposited in the antiSMASH database, a total of 843 BGCs with lower than 75% similarity scores to characterized clusters within the MIBiG database are presented. This survey provides the biosynthetic diversity of these BGCs and an assessment of the predicted chemical space yet to be discovered. Considering the mere snapshot of myxobacteria included in this analysis, these untapped BGCs exemplify the potential for natural product discovery from myxobacteria.
机译:随着测序细菌数量的增加,用于生物合成基因簇(BGC)的细菌基因组的挖掘已成为天然产物发现的关键组成部分。粘菌球菌是生物活性次生代谢产物的著名来源,该菌跨越三个亚纲,全部包括天然产物生产代表。利用BiG-SCAPE-CORASON平台生成序列相似性网络,其中包含来自存储在antiSMASH数据库中的36个测序粘菌的994个BGC,总共提出了843个与MIBiG数据库中特征化簇的相似性得分低于75%的BGC。这项调查提供了这些BGC的生物合成多样性,并对尚未发现的预测化学空间进行了评估。考虑到该分析中仅包括粘细菌的快照,这些未开发的BGC证明了从粘细菌发现天然产物的潜力。

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