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Ion-SpecificInduced Fluctuations and Free Energeticsof Aqueous Protein Hydrophobic Interfaces: Toward Connecting to Specific-IonBehaviors at Aqueous Liquid–Vapor Interfaces

机译:特定离子诱发波动和自由能蛋白质疏水性界面的研究:连接特定离子液体-水蒸气界面的行为

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摘要

We explore anion-induced interface fluctuations near protein–water interfaces using coarse-grained representations of interfaces as proposed by Willard and Chandler (J. Phys. Chem. B 2010, 114, 1954−1958 [] [] []). We use umbrella sampling molecular dynamics to compute potentials of mean force along a reaction coordinate bridging the state where the anion is fully solvated and one where it is biased via harmonic restraints to remain at the protein–water interface. Specifically, we focus on fluctuations of an interface between water and a hydrophobic region of hydrophobin-II (HFBII), a 71 amino acid residue protein expressed by filamentous fungi and known for its ability to form hydrophobically mediated self-assemblies at interfaces such as a water/air interface. We consider the anions chloride and iodide that have been shown previously by simulations as displaying specific-ion behaviors at aqueous liquid–vapor interfaces. We find that as in the case of a pure liquid–vapor interface, at the hydrophobic protein–water interface, the larger, less charge-dense iodide anion displays a marginal interfacial stability compared with that of the smaller, more charge-dense chlorideanion. Furthermore, consistent with the results at aqueous liquid–vaporinterfaces, we find that iodide induces larger fluctuations of theprotein–water interface than chloride.
机译:我们使用Willard和Chandler提出的界面的粗粒度表示法,探索了蛋白质-水界面附近阴离子引起的界面波动(J. Phys。Chem。B 2010,114,1954-1958 [] [] [])。我们使用伞式采样分子动力学方法来计算沿着反应坐标的平均力的潜力,该坐标将阴离子完全溶剂化的状态与通过谐波抑制作用被偏置而保留在蛋白质-水界面上的状态桥接起来。具体来说,我们专注于水和疏水蛋白II(HFBII)疏水区之间的界面波动,HFBII是一种由丝状真菌表达的71个氨基酸残基蛋白,因其能够在界面(如a)上形成疏水介导的自组装而闻名水/空气接口。我们认为先前通过模拟显示的阴离子氯化物和碘化物在水-水蒸汽界面显示出特定的离子行为。我们发现,就纯液体-蒸汽界面而言,在疏水性蛋白质-水界面处,与较小的,电荷密度更大的氯离子相比,较大的,电荷密度较小的碘化物阴离子显示出临界的界面稳定性。阴离子。此外,与含水液体-蒸汽的结果一致界面,我们发现碘化物会引起更大的波动蛋白质-水的界面要比氯化物大。

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