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Modeling holin function during lambda phage infection of Escherichia coli.

机译:在大肠杆菌的λ噬菌体感染过程中模拟霍林功能。

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摘要

Bacteriophage lambda is a virus that infects the bacterium Escherichia coli, terminating its infection cycle with a catastrophic lysis event. Lysis timing is regulated by holins --- small bacteriophage-encoded proteins that accumulate within the host inner membrane during late-protein synthesis after infection and cause lysis of the host cell at a precise genetically programmed time.;The oligomerization of holin proteins to form 'rafts' within the membrane is a central step in holin function. Within the context of our model we investigate the dependence of the raft number distribution on the energized host membrane --- with a focus on the maximum number of rafts expected after cell death.;We review general and lysis-specific phage phenomenology. We then derive an analytic expression for the lysis time distribution based on collective holin properties. We find that an earlier two-stage nucleation model leads to significant asymmetry of the lysis timing distribution, which has not been previously reported. We undertook single-cell studies of bacteriophage lambda induced lysis of E. coli which detailed lysis time distributions for both normal lysis and KCN-induced early lysis. These detailed distributions provide more' precise average lysis time and width, previously characterized with batch cultures, but also the asymmetry of the lysis timing about its mean for the first time. Statistical errors of these moments have also been estimated. With these measures, we constrain the parameters of a quantitative two-stage nucleation model of lysis timing via holin domain nucleation followed by hole nucleation within those domains. We use the lysis asymmetry to estimate the rate of hole formation within condensed holin domains in the bacterial inner membrane. We find that the delay between the time of KCN poisoning and host cell lysis is anomalously large compared to the lysis width, suggesting the existence of a reservoir of holin in the host bacterium that allows the continued addition of active holin to the bulk of the membrane after host cell death. Continued holin addition after host death leads to much earlier lysis upon cell death, and so represents a new back door to lysis for bacteriophage lambda.
机译:噬菌体λ是一种感染大肠杆菌的病毒,其感染周期以灾难性的裂解事件终止。裂解的时机是由空洞蛋白调节的。空洞蛋白是一种小噬菌体编码的蛋白质,在感染后的后期蛋白质合成过程中会在宿主内膜中积累,并在精确的基因编程时间导致宿主细胞裂解; holin蛋白的寡聚化形成膜内的“筏”是呼林蛋白功能的中心步骤。在我们的模型的背景下,我们研究了筏数分布对带电宿主膜的依赖性-并着眼于细胞死亡后预期的最大筏数。;我们综述了一般的和裂解特异性的噬菌体现象学。然后,我们基于集体霍林特性得出裂解时间分布的解析表达式。我们发现,较早的两阶段成核模型会导致裂解时间分布的显着不对称,这一点以前没有报道过。我们进行了噬菌体λ诱导的大肠杆菌裂解的单细胞研究,该研究详细列出了正常裂解和KCN诱导的早期裂解的裂解时间分布。这些详细的分布提供了更精确的平均裂解时间和宽度,这是以前用分批培养法表征的,而且还首次显示了裂解时间关于其平均值的不对称性。还估计了这些时刻的统计误差。通过这些措施,我们通过霍林域成核,然后在这些域内进行空穴成核,来限制裂解时间的定量两阶段成核模型的参数。我们使用裂解不对称性来估计细菌内膜的浓缩霍林域内孔形成的速率。我们发现,与裂解宽度相比,KCN中毒时间和宿主细胞裂解之间的延迟异常大,这表明宿主细菌中存在霍林水库,可将活性霍林继续添加到膜的大部分中宿主细胞死亡后。宿主死亡后持续加入霍林可导致细胞死亡时更早的裂解,因此代表了噬菌体λ裂解的新后门。

著录项

  • 作者

    Ryan, Gillian L.;

  • 作者单位

    Dalhousie University (Canada).;

  • 授予单位 Dalhousie University (Canada).;
  • 学科 Biophysics General.
  • 学位 Ph.D.
  • 年度 2010
  • 页码 131 p.
  • 总页数 131
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 非洲史;
  • 关键词

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