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ZNF300 may influence the metastatic properties in pancreatic ductal adenocarcinoma.

机译:ZNF300可能影响胰腺导管腺癌的转移特性。

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摘要

Aberrant DNA methylation of promoter CpG islands (CGI) is a contributing.;factor that facilitates the dysregulation of gene expression to promote the.;tumorigenesis of pancreatic ductal adenocarcinoma (PDAC). Moreover, due to the.;overwhelming number of PDAC patients presented with metastasis at the time of.;diagnosis, it is necessary to better understand the process of metastasis. To understand.;the role of DNA methylation may in the metastasis of PDAC, two isogenic cells lines,;generated by Dr. Isaiah Fidler at the University of Texas MD Anderson Cancer.;Center, were used as a cell culture model. These cell lines were generated from.;orthotopic injections of an established pancreatic cancer cell line, colo357, into the.;pancreas of nude mice. Upon injection, metastasis formed in the liver. Metastatic cells.;from the metastases were isolated and grown in culture to yield a lowly metastatic cell.;line, fast growing (FG). This process was repeated using FG cells, and after three.;rounds of injection and isolation, the enriched metastatic cells were isolated to yield a.;highly metastatic variant, L3. 6. Preliminary work, performed by previous lab.;members, identified genes exhibiting promoter hypermethylation in a high metastatic.;cell line, L3.6pl, compared to the lowly metastatic isogenic variant cell line, FG. One.;of those genes, ZNF300, was chosen as a candidate gene for many reasons. First,;analysis of percent methylation within the ZNF300 CGI indicated increased.;methylation among L3.6pl cells compared to FG, specifically sixteen percent to one percent, respectively. In addition to increased methylation, the region of the ZNF300.;promoter that was hypermethylated was also shown to affect promoter activity.;according to luciferase promoter assays. Therefore, it was hypothesized that the.;observed hypermethylation in L3.6pl cells may lead to decreased ZNF300 expression.;Moreover, ZNF300 expression was identified in pancreatic tumor samples from ten.;PDAC patients via immunohistochemical staining; however, analysis from lymph.;node metastases from many of these patients showed diminished ZNF300 expression.;compared to the primary tumor. Taken together, this data supports our overall goal to.;determine if ZNF300 hypermethylation correlates to ZNF300 expression, and more.;importantly, if this correlation is related to the metastatic ability of L3.6pl cells.;To determine if ZNF300 is epigenetically regulated, methylation levels were.;quantified via COBRA and bisulfite sequencing in both FG and L3.6pl cells.;Additionally, ZNF300 expression was measured via qRT-PCR and western blotting.;analysis. To determine the functional role of ZNF300 in the metastatic process of.;L3.6pl, we attempted to overexpress ZNF300 using the p-RetroX-Tre3G Tet-ON.;inducible expression system. Following induction using doxycycline, both the.;expression and migratory ability were measured.;The data in this study concludes that, contrary to preliminary data, the ZNF300.;CpG island is not differentially methylated in L3.6pl cells compared to FG cells. Our.;expression data is in accordance with the methylation levels, and thus, indicated no.;significant difference in ZNF300 expression between the two isogenic variant cell.;lines. Moreover, we were unable to induce ZNF300 expression using the retroviral inducible system, but rather noted potentially off target effects of doxycycline in.;infected L3.6pl cells. Due to our inability to induce ZNF300 expression, we are unable.;to identify the role of ZNF300 in the metastatic process of PDAC.
机译:启动子CpG岛(CGI)的异常DNA甲基化是促进基因表达失调以促进胰腺导管腺癌(PDAC)成瘤的一个促成因素。此外,由于在诊断时有大量PDAC患者出现转移,因此有必要更好地了解转移过程。为了理解; DNA甲基化的作用可能在PDAC的转移中,由德克萨斯大学MD安德森癌症中心的Isaiah Fidler博士产生的两个同基因细胞系被用作细胞培养模型。这些细胞系是由将已建立的胰腺癌细胞系colo357原位注射到裸鼠的胰腺中产生的。注射后,在肝中形成转移。从转移中分离出转移细胞并使其在培养中生长,以产生低转移细胞系,快速生长(FG)。使用FG细胞重复该过程,并且在三轮注射和分离之后,分离出富集的转移细胞,以产生高转移变体L3。 6.由先前实验室进行的初步工作;成员鉴定了与低转移等基因变异细胞系FG相比在高转移性L3.6pl细胞系中表现出启动子高度甲基化的基因。其中一个基因,ZNF300,由于多种原因被选为候选基因。首先,对ZNF300 CGI内的甲基化百分比的分析表明,与FG相比,L3.6pl细胞之间的甲基化增加了,分别为16%至1%。根据荧光素酶启动子测定,除了增加的甲基化,还显示了ZNF300启动子的高甲基化区域会影响启动子活性。因此,假设在L3.6p1细胞中观察到的高甲基化可能导致ZNF300表达降低。此外,从十个胰腺肿瘤样品中鉴定出ZNF300表达。然而,从淋巴结转移的分析表明,与原发肿瘤相比,许多这些患者的淋巴结转移显示ZNF300表达降低。综上所述,这些数据支持我们的总体目标:确定ZNF300高甲基化是否与ZNF300表达相关,以及更多;重要的是,这种相关是否与L3.6pl细胞的转移能力相关。确定ZNF300是否受表观遗传调控,通过COBRA和亚硫酸氢盐测序对FG和L3.6pl细胞中的甲基化水平进行了定量。另外,通过qRT-PCR和蛋白质印迹法测量了ZNF300的表达。为了确定ZNF300在L3.6pl转移过程中的功能,我们尝试使用p-RetroX-Tre3G Tet-ON诱导表达系统过表达ZNF300。用强力霉素诱导后,测定了表达和迁移能力。本研究的数据得出结论,与初步数据相反,与FG细胞相比,L3.6p1细胞中的ZNF300.CpG岛甲基甲基化程度不同。我们的表达数据与甲基化水平一致,因此表明两个等基因变异细胞之间ZNF300表达的显着差异。此外,我们无法使用逆转录病毒诱导系统诱导ZNF300表达,而是注意到在被感染的L3.6pl细胞中强力霉素具有潜在的脱靶作用。由于我们无法诱导ZNF300表达,因此我们无法确定ZNF300在PDAC转移过程中的作用。

著录项

  • 作者

    Fisher, Amanda.;

  • 作者单位

    University of Delaware.;

  • 授予单位 University of Delaware.;
  • 学科 Biology Cell.;Biology Molecular.;Health Sciences Oncology.
  • 学位 M.S.
  • 年度 2014
  • 页码 97 p.
  • 总页数 97
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

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