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A systematic approach to protein crystal growth and the investigation of intrinsic fluorescence for scoring protein crystals.

机译:一种蛋白质晶体生长的系统方法和对蛋白质晶体评分的固有荧光的研究。

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摘要

One of the most promising developments in treatment of molecular disease is structure based drug design. The success of this method depends on knowing the three-dimensional structure of the target macromolecules (usually proteins or enzymes) to a high degree of resolution. Typically, X-ray crystallography is the method used for structure determination. In order to perform X-ray analysis, a diffraction quality crystal must be grown. It is well known that protein crystal growth (PCG) is the bottleneck of the whole process of structure based drug design. The traditional method of growing protein crystals is screening and relies on trial and error. The Wilson Crystallization Slot (WCS) can be used to create a systematic strategy for growing protein crystals. In this work, regions of the WCS were explored to see if there was a correlation between the region of the slot and the number and size of the crystals grown. Three different regions of the slot were tested using lysozyme and ovalbumin crystals. Results for lysozyme show that a fewer number of larger crystals are obtained just inside the slot and a greater number of smaller crystals are obtained further into the slot.;This work also investigates intrinsic fluorescence for scoring protein crystals. Currently, there is no method for scoring protein crystals. A scoring assay would be a valuable tool to aid in the selection of crystals for X-ray diffraction analysis. Intrinsic fluorescence is a potential candidate for scoring protein crystals because it is a sensitive non-invasive technique. Crystals of lysozyme, glucose isomerase, thaumatin, thaumatin I, and ESA were analyzed using intrinsic fluorescence and X-ray analysis. Results show that there is a correlation between the fluorescence excitation maximum and the X-ray diffraction resolution limit for the protein crystals studied. A practical implication of using intrinsic fluorescence as a scoring tool for PCG is that crystals of common crystallizing agents do not fluoresce at wavelengths used in analysis of proteins. Intrinsic fluorescence could not only help researchers determine which protein crystals are suitable for X-ray diffraction analysis but also help discriminate between protein crystals and unwanted salt crystals.
机译:基于分子的药物设计是治疗分子疾病的最有希望的发展之一。该方法的成功取决于高度了解目标大分子(通常是蛋白质或酶)的三维结构。通常,X射线晶体学是用于确定结构的方法。为了进行X射线分析,必须生长具有衍射质量的晶体。众所周知,蛋白质晶体生长(PCG)是基于结构的药物设计全过程的瓶颈。生长蛋白质晶体的传统方法是筛选,并且需要反复试验。威尔逊结晶槽(WCS)可用于创建用于生长蛋白质晶体的系统策略。在这项工作中,探索了WCS的区域,以了解缝隙区域与生长的晶体的数量和大小之间是否存在相关性。使用溶菌酶和卵清蛋白晶体测试了缝隙的三个不同区域。溶菌酶的结果表明,仅在缝隙内部可获得较少的较大晶体,而在缝隙内部仍可获得大量较小的晶体。这项工作还研究了用于标记蛋白质晶体的内在荧光。当前,没有评分蛋白质晶体的方法。计分分析将是有价值的工具,有助于选择晶体进行X射线衍射分析。内部荧光是对蛋白质晶体进行评分的潜在候选方法,因为它是一种敏感的非侵入性技术。使用固有荧光和X射线分析法分析了溶菌酶,葡萄糖异构酶,奇异果甜蛋白,奇异果甜蛋白I和ESA的晶体。结果表明,所研究的蛋白质晶体的荧光激发最大值与X射线衍射分辨率极限之间存在相关性。使用固有荧光作为PCG评分工具的实际含义是,普通结晶剂的晶体不会在用于蛋白质分析的波长处发出荧光。内在荧光不仅可以帮助研究人员确定哪种蛋白质晶体适合进行X射线衍射分析,而且还可以区分蛋白质晶体和不需要的盐晶体。

著录项

  • 作者

    McDonald, Heather Michelle.;

  • 作者单位

    Mississippi State University.;

  • 授予单位 Mississippi State University.;
  • 学科 Physical chemistry.;Analytical chemistry.;Biochemistry.
  • 学位 Ph.D.
  • 年度 2002
  • 页码 77 p.
  • 总页数 77
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

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