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Monte Carlo random walk simulation as a complement to experimental and theoretical approaches: Application to mass transfer in fish muscle tissue.

机译:蒙特卡洛随机行走模拟作为实验和理论方法的补充:在鱼肌肉组织中的传质中的应用。

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Mass transfer processes in food systems, such as solute infusion, are poorly understood because of their complex nature. Food systems contain porous matrices and a variety of continuous phases within cellular tissues. Mass transfer processes are generally not pure diffusion: often convection, binding and obstructing diffusion will occur. Monte Carlo (MC) simulation has been increasingly used in life science and engineering to elucidate molecular transport in biological systems. However, there are few articles available discussing MC simulation in food processing, especially mass transfer. The main goal of this study was to show the inherent simplicity of the MC approach and its potential when combined with traditional experimental and theoretical approaches to better describe and understand mass transfer processes. A basic framework for MC---random walk simulation applied to a diffusion problem---is developed in this project. Infusion of two sizes of dextran macromolecules in fish muscle cells is used to apply the MC framework in combination with Fluorescence Recovery After Photobleaching experiments. Effective diffusivity coefficients within cells, considering the degree of obstruction due to the myofibrilar matrix, are assessed. Then, the results are used as input in a mathematical model that was developed for theoretical simulation of mass transfer in the multi-cellular tissue. Diffusivity values obtained by the MC framework had an SD of +/-0.02 [mum2/s] around the true value of 0.25 [mum2/s]. MC results for degree of obstruction were 0.29 and 0.34 for dextran FD10S and FD20S, respectively, and the De values were 23.7 and 11.2 [mum2/s]. The statistical error in the estimation of De was estimated to be [22.8-24.6] and [9.7-12.7] (95% CI), where average experimental values of 24.3 [mum2/s] for FD10S and 11.4 [mum2/s] for FD20S were captured by the respective interval. The theoretical model showed a significant influence of the cell membrane characteristics and tissue porosity in both the degree of solute penetration and the solute distribution between intra- and extra-cellular space. The combined approach was successfully applied to a diffusion problem. Overall, it is expected that the present work will contribute towards the application of MC simulation in the field of Food Science and Engineering.
机译:由于其复杂性,人们对食品系统中的传质过程(如溶质注入)了解甚少。食品系统包含多孔基质和细胞组织内的各种连续相。传质过程通常不是纯粹的扩散:通常会发生对流,结合和阻碍扩散。蒙特卡洛(MC)模拟已越来越多地用于生命科学和工程学中,以阐明生物系统中的分子运输。但是,很少有文章讨论食品加工中的MC模拟,尤其是传质。这项研究的主要目的是展示与传统的实验和理论方法相结合以更好地描述和理解传质过程的MC方法固有的简单性及其潜力。此项目开发了MC的基本框架-适用于扩散问题的随机游走仿真-。在鱼肌肉细胞中注入两种大小的右旋糖酐大分子可用于将MC框架与光漂白实验后的荧光恢复相结合。考虑到由于肌原纤维基质引起的阻塞程度,评估了细胞内的有效扩散系数。然后,将结果用作数学模型的输入,该数学模型已开发用于理论模拟多细胞组织中的传质。通过MC框架获得的扩散率值的SD约为+/- 0.02 [mum2 / s],真实值约为0.25 [mum2 / s]。右旋糖酐FD10S和FD20S的阻塞度MC结果分别为0.29和0.34,De值分别为23.7和11.2 [mum2 / s]。 De的估计中的统计误差估计为[22.8-24.6]和[9.7-12.7](95%CI),其中FD10S的平均实验值为24.3 [mum2 / s],而FD10S的平均实验值为11.4 [mum2 / s] FD20S按各自的时间间隔捕获。该理论模型显示了细胞膜特性和组织孔隙度对溶质渗透程度和细胞内和细胞外空间之间的溶质分布都有重大影响。组合方法已成功应用于扩散问题。总的来说,预计当前的工作将有助于MC模拟在食品科学和工程领域的应用。

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