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Molecular genetics and population genomics of the maintenance and breakdown of the floral polymorphism tristyly.

机译:维持和破坏花卉多态性的分子遗传学和种群基因组学。

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摘要

Tristyly has evolved independently in several flowering plant families and functions to promote outcrossing by disassortative mating. The floral polymorphism is susceptible to evolutionary breakdown resulting in frequent transitions from outcrossing to predominant self-fertilization. By integrating experimental studies with analyses of genomic data and population genetic computer simulations, my Ph.D. thesis investigates the genetic and population genomic basis for the maintenance of this genetic polymorphism, and its breakdown to selfing in the annual aquatic Eichhornia paniculata (Pontederiaceae).;The transition from outcrossing to selfing in E. paniculata is associated with multiple, independent, long-distance colonization events from N.E. Brazil to the Caribbean and Central America, and a reduction in the effective population size of selfing lineages. The joint influence of these genetic and demographic factors was associated with several genomic consequences, including an increased frequency of effectively neutral mutations, more efficient removal of very strongly deleterious mutations, and the down-regulation of ∼1000 genes. These findings suggest that substantial differences in patterns of muttion and gene expression may accompany transitions from outcrossing to selfing in plants.;Genetic crosses and progeny tests conducted under glasshouse conditions demonstrated strong linkage between the S and M loci governing tristyly, with the loci separated by a map distance of 2.7 cM. Controlled crosses using semi-homostylous mid- and long-styled selfing variants from the Caribbean (ssMM) and Central America ( ssmm) combined with genetic mapping of a backcross progeny indicated that style length and anther height localized to the center of linkage group 5. This finding strongly suggests that this region contains the M locus. Population genomic data was consistent with the hypothesis that the M locus is maintained by frequency-dependent selection. Finally, QTL mapping studies also demonstrated that the two semi-homstylous variants of E. paniculata from the Caribbean and Central America were governed by different sets of modifier genes unlinked to the M locus supporting their independent origins. My thesis research provides novel insights into the biology of tristyly, genetic architecture of reproductive adaptation, and the genomic consequences of mating system transitions. It provides a contemporary genomic perspective complementing the earlier seminal studies of Darwin and Fisher on tristyly.
机译:Tristyly已在几个开花植物科中独立进化,并通过杂配交配来促进异交。花型多态性易受进化破坏,导致频繁的从异源杂交到主要的自体受精。通过将实验研究与基因组数据分析和种群遗传计算机模拟相结合,我获得了博士学位。论文研究了维持这种遗传多态性的遗传和种群基因组基础,以及一年生水生凤眼兰(Pontederiaceae)中自交的分解。 NE的近距离定植事件巴西到加勒比海和中美洲,自交系的有效人口数量减少。这些遗传和人口因素的共同影响与若干基因组后果有关,包括增加有效中性突变的频率,更有效地去除非常有害的突变以及下调约1000个基因。这些发现表明,突变和基因表达方式的实质差异可能伴随着植物从异源杂交到自交的转变。;在温室条件下进行的遗传杂交和后代测试表明,S和M位点之间的控制力很强,三位一体的位点由地图距离为2.7 cM。使用来自加勒比海(ssMM)和中美洲(ssmm)的半同源的中型和长型自交变种进行的控制杂交,以及回交后代的遗传作图,表明样式长度和花药高度位于连锁群5的中心。该发现强烈暗示该区域包含M基因座。群体基因组数据与以下假设相符:M位点通过频率依赖性选择得以维持。最后,QTL作图研究还表明,来自加勒比海和中美洲的E. paniculata的两个半同质变体受不同的修饰基因集支配,这些修饰基因与支持其独立起源的M基因座不相关。我的论文研究提供了有关tri的生物学,生殖适应的遗传结构以及交配系统过渡的基因组后果的新颖见解。它提供了当代的基因组学观点,补充了达尔文和费舍尔对早期研究的开创性研究。

著录项

  • 作者

    Ramesh, Arunkumar.;

  • 作者单位

    University of Toronto (Canada).;

  • 授予单位 University of Toronto (Canada).;
  • 学科 Evolution development.;Genetics.
  • 学位 Ph.D.
  • 年度 2016
  • 页码 273 p.
  • 总页数 273
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

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