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The reaction of 1-aminocyclopropane-1-carboxylate synthase with a substrate analog, Se-adenosyl-L-selenomethionine.

机译:1-氨基环丙烷-1-羧酸合酶与底物类似物Se-腺苷-L-硒代蛋氨酸的反应。

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摘要

The reaction specificity of 1-amino-1-cyclopropanecarboxylate synthase is dictated in large part by interactions with the sulfonium pole of its substrate, S-adenosylmethionine (SAM) [McCarthy et al (2001) Biochemistry 40, 12276-84]. It is shown here that this enzyme also reacts with the seleno analog of SAM, Se-adenosylselenomethionine (SeAM). The kcat/Km value of 6.0 x 105 M-1s-1 is very close to that of SAM (9.7 x 105 M-1s-1) [White et al (1994) Proc. Natl. Acad. Sci. U.S.A. 91, 12428-12432]. The detailed reactions and rate-determining steps however, differ significantly. The SAM reaction is completely diffusion-controlled [Li et al 1997, Biochemistry, 36, 15477-88], but that with SeAM reaction is only 30% diffusion-controlled. The quinonoid intermediate, which accumulates in the steady state in the SAM reaction, cannot be observed in the corresponding reaction with SeAM, nor can it be detected under presteady stale conditions. There is no significant kinetic Calpha-hydrogen isotope effect with either substrate, but the apparent rate constant for formation of the quinonoid in the SAM reaction is decreased from 95s-1 to 75s-1 by the heavier isotope. The rate-determining steps for the SAM reaction kcat and kcat/Km values are determined by elimination of 5'-methylthioadenosine and substrate association respectively, while they are defined by the transaldimination reactions for SeAM.
机译:1-氨基-1-环丙烷甲酸合酶的反应特异性在很大程度上取决于与其底物substrate-腺苷甲硫氨酸(SAM)的相互作用[McCarthy et al(2001)Biochemistry 40,12276-84]。此处显示该酶也与SAM的硒类似物Se-腺苷硒代蛋氨酸(SeAM)反应。 6.0 x 105 M-1s-1的kcat / Km值非常接近SAM的kcat / Km值(9.7 x 105 M-1s-1)[White et al(1994)Proc.Natl.Acad.Sci.USA 90:5873-5877。 Natl。学院科学U.S.A. 91,12428-12432]。然而,详细的反应和确定速率的步骤明显不同。 SAM反应是完全受扩散控制的[Li等人,1997,Biochemistry,36,15477-88],但是与SeAM反应相比,只有30%受扩散控制。在SAM反应中以稳态积累的醌类中间体在与SeAM的相应反应中无法观察到,也无法在稳定的陈旧条件下检测到。两种底物都没有显着的动力学Calpha-氢同位素效应,但是由于重同位素的存在,SAM反应中形成醌的表观速率常数从95s-1降低到75s-1。 SAM反应的速率测定步骤kcat和kcat / Km值分别通过消除5'-甲硫基腺苷和底物缔合来确定,而它们由SeAM的转铝反应确定。

著录项

  • 作者

    Malashock, Daniel Stephen.;

  • 作者单位

    University of California, Berkeley.;

  • 授予单位 University of California, Berkeley.;
  • 学科 Chemistry Biochemistry.
  • 学位 Ph.D.
  • 年度 2007
  • 页码 43 p.
  • 总页数 43
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 生物化学;
  • 关键词

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