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Detection of rolling leukocytes from intravital microscopy images.

机译:从体内显微镜图像检测滚动白细胞。

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摘要

The problem of identifying and counting rolling leukocytes within intravital microscopy images is of both theoretical and practical interest. In order to identify the leukocytes with both bright and dark appearances, we propose detection method based on Bayesian classification. The classification depends on a feature score, the gradient inverse coefficient of variation (GICOV), which serves to discriminate rolling leukocytes from a possibly cluttered environment. The leukocyte detection process consists of three sequential steps. The first step utilizes an ellipse matching algorithm to coarsely identify the leukocytes by finding the ellipses with a locally maximal GICOV value. In the second step, starting from each of the ellipses found in the first step, a B-spline snake is evolved to refine the leukocytes boundaries by maximizing the associated GICOV. The third and final step retains only the extracted contours that have a GICOV value above the analytically determined threshold.; As an extension, we utilize the marked point process (MPP) framework while aiming at improving both the accuracy and efficiency of the detection process by means of exploiting the spatial information and leukocyte inter-relationships. The MPP provides a useful and theoretically well-established tool for integrating spatial information into the image analysis process. We construct a Markov chain Monte Carlo algorithm to obtain the maximum a posteriori (MAP) estimation of a set of candidate points corresponding to the centroids of leukocytes observed in the image. The optimal solution, in terms of MAP principle, is computed with respect to all leukocytes, rather than a single leukocyte. A quantitative study of our detection approach demonstrates results that exceed the solution quality given by two other competing detection methods, using a dataset consisting of 60 intravital microscopic video sequences each 31 frames long. Our approach can serve as a fully automated substitute to the tedious and time-consuming manual rolling leukocyte detection process.; The real-time rolling leukocyte detection is implemented using the Mercury AdapDev multiprocessor architecture. Additionally, the problems of associated feature extraction with micro-particle tracer detection in microvessels are discussed in this thesis.
机译:在活体内显微镜图像中鉴定和计数滚动白细胞的问题在理论上和实践上都有兴趣。为了识别亮白相间的白细胞,我们提出了一种基于贝叶斯分类的检测方法。分类取决于特征得分,即梯度逆变异系数(GICOV),该特征可用于区分滚动白细胞与可能混乱的环境。白细胞检测过程包括三个连续步骤。第一步是利用椭圆匹配算法,通过找到局部最大GICOV值的椭圆来粗略地识别白细胞。在第二步中,从第一步中发现的每个椭圆开始,通过最大化关联的GICOV,进化出一条B样条蛇以细化白细胞边界。第三步也是最后一步,仅保留GICOV值高于分析确定的阈值的提取轮廓。作为扩展,我们利用标记点过程(MPP)框架,同时旨在通过利用空间信息和白细胞相互关系来提高检测过程的准确性和效率。 MPP为将空间信息整合到图像分析过程中提供了有用且理论上完善的工具。我们构造马尔可夫链蒙特卡罗算法,以获得与图像中观察到的白细胞质心相对应的一组候选点的最大后验(MAP)估计。根据MAP原理,最佳解决方案是针对所有白细胞而不是单个白细胞计算的。我们的检测方法的定量研究表明,使用由60个活体显微视频序列(每个31帧长)组成的数据集,结果超过了其他两种竞争检测方法所提供的解决方案质量。我们的方法可以完全替代繁琐且费时的手动滚动白细胞检测过程。实时滚动白细胞检测是使用Mercury AdapDev多处理器体系结构实现的。此外,本文还讨论了微容器中与微粒示踪剂检测相关的特征提取问题。

著录项

  • 作者

    Dong, Gang.;

  • 作者单位

    University of Virginia.;

  • 授予单位 University of Virginia.;
  • 学科 Engineering Electronics and Electrical.; Engineering Biomedical.
  • 学位 Ph.D.
  • 年度 2006
  • 页码 187 p.
  • 总页数 187
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 无线电电子学、电信技术;生物医学工程;
  • 关键词

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