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Sizing and classification of biological particles using ring-wedge detector and neural networks.

机译:使用环形楔形检测器和神经网络对生物颗粒的大小和分类。

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摘要

We describe two methods that are suitable for the sizing and classification of small particles in the size range from 0.1mum to 200mum. One is called diffraction pattern sampling, which uses sampling of the diffraction pattern in the Fourier optical transform plane. The other is a direct image processing in which the microscopic images of the objects are obtained and then direct image processing is used to perform the classification.; For the diffraction sampling method, we emphasize the study of spherical particles. The Fourier transform patterns are used and they are shown to be a good approximation in the forward scattering region. As a result, we show that it is possible to size a group of moving particles using diffraction pattern sampling. A series of experiments is performed using a Ring-Wedge diffraction pattern sampling system to analyze the moving particles. The integral inversion method is used to recover the size distribution of the samples and the results are accurate. We also present a new theoretical analysis of diffraction pattern sampling for a cylindrical configuration that is valid for a 360 degree azimuthal angle. The electromagnetic field in the focal position of a linearly polarized converging cylindrical wave incident normal to the axis of symmetry of the cylinder is derived based on the Maxwell's equations. The scattered field is then studied for different cylinder parameters and for different polarizations of the incident plane wave. This derivation gives out the precise forms for the scattering at any angle and thus verifies the more commonly used forms from Fourier optics. The derivation also establishes a theoretical connection between results at infinity and results in the optical transform plane. This is a new theory for diffraction pattern sampling based on electromagnetic theory as well as Fourier optics.; For the direct image processing, we use the biological samples---diatoms as the investigation agents. A novel method for the automatic classification of biological specimens is presented. This method consists of two major parts. One is a machine vision based preprocessing, and it involves a series of carefully organized algorithms to separate the agent cells from the background and then many more algorithms to calculate the morphological feature values. The other part is a neural network classifier that takes the selected feature values as the inputs. The neural network is refined and optimized in the process and the classification results are excellent. We obtain 80% accuracy for an arbitrary grouping of 8 diatoms and 95% accuracy for a group of diatoms that are visually distinctive. The method is potentially applicable to the auto-classification of all kinds of biological specimens in the real time situation.
机译:我们描述了两种适用于大小范围从0.1微米到200微米的小颗粒的大小分类的方法。一种称为衍射图样采样,它使用傅里叶光学变换平面中的衍射图样采样。另一个是直接图像处理,其中获取对象的显微图像,然后使用直接图像处理进行分类。对于衍射采样方法,我们着重研究球形颗粒。使用了傅立叶变换模式,并且显示出它们在前向散射区域中是很好的近似。结果表明,使用衍射图样可以确定一组运动颗粒的大小。使用Ring-Wedge衍射图样采样系统执行了一系列实验,以分析运动的粒子。积分反演方法用于恢复样本的大小分布,结果准确。我们还提出了一种新的理论分析方法,用于对圆柱形构造的衍射图样采样,该构造对于360度方位角有效。垂直于圆柱对称轴入射的线性极化会聚圆柱波在焦点位置的电磁场是根据麦克斯韦方程导出的。然后针对不同的圆柱体参数和入射平面波的不同极化研究散射场。该推导给出了任何角度的散射的精确形式,从而验证了傅立叶光学公司更常用的形式。该推导还在无穷大结果与光学变换平面中的结果之间建立了理论联系。这是基于电磁学原理和傅立叶光学技术的衍射图样采样的新理论。对于直接的图像处理,我们使用生物学样品---硅藻作为研究试剂。提出了一种自动分类生物标本的新方法。此方法包括两个主要部分。一种是基于机器视觉的预处理,它涉及一系列精心组织的算法,以将代理细胞与背景分离,然后再使用更多算法来计算形态特征值。另一部分是神经网络分类器,它将所选特征值用作输入。在此过程中对神经网络进行了优化和优化,分类结果非常好。对于8个硅藻的任意分组,我们获得80%的精度,对于一组视觉上独特的硅藻,我们获得95%的精度。该方法可能适用于实时情况下各种生物样本的自动分类。

著录项

  • 作者

    Yan, Weizhen.;

  • 作者单位

    University of Rochester.;

  • 授予单位 University of Rochester.;
  • 学科 Physics Optics.
  • 学位 Ph.D.
  • 年度 2007
  • 页码 160 p.
  • 总页数 160
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 光学;
  • 关键词

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