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Automated Insulin Granule Segmentation from Electron Photomicrographs of Rat Pancreatic β-Cells

机译:从大鼠胰岛β细胞的电子显微照片中自动进行胰岛素颗粒分割

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Increased blood glucose stimulates pancreatic β-cells and induces an exocytotic release of insulin. The β-cell, whichcontains ~10^4 insulin-containing granules, releases only a few percent of the granules during a given stimulus such as ameal. The temporal response function to a square wave increase in the concentration of glucose is characteristicallybiphasic. It is not known whether the granules exhibit random or directed migration patterns as a function of phase.Directed migration would suggest the development of an intracellular gradient directing the path and velocity of insulingranule movement. Our ongoing research investigates this process using manual morphometric analysis of electronmicrographs of rat pancreatic β-cells. This is a tedious and time-consuming stereological process. Consequently, wehave developed an automated algorithm for accurately segmenting and deriving granule counts, areas, and measuringdistance to the plasma membrane. The method is a data-driven image processing approach that implementsMahalanobis classifiers to hierarchically classify pixel candidates and subsequently pixel aggregates as insulin granules.Granule cores and halos are classified independently and fused by intersecting the convex difference of granule haloswith core candidates. Once fused, total and individual granule areas and distance metrics to the β-cell plasmamembrane are obtained. This algorithm provides a rapid and accurate method for the determination of granulenumbers, location, and potential gradients in the pancreatic β-cell under different experimental conditions.
机译:血糖升高会刺激胰腺β细胞并诱导胰岛素的胞外释放。包含〜10 ^ 4含胰岛素的颗粒的β细胞在给定的刺激(例如全血)期间仅释放百分之几的颗粒。对葡萄糖浓度的方波增加的时间响应函数是特征性的双相的。尚不清楚颗粒是否表现出随相位变化的随机或定向迁移模式。定向迁移将提示细胞内梯度的发展,该梯度指导胰岛素颗粒运动的路径和速度。我们正在进行的研究使用大鼠胰腺β细胞电子显微镜的形态学分析对这一过程进行了研究。这是一个繁琐且耗时的立体过程。因此,我们已经开发出一种自动算法,可以准确地分割和推导颗粒计数,面积以及与质膜的距离。该方法是一种数据驱动的图像处理方法,该方法实现了Mahalanobis分类器对像素候选对象进行分层分类,然后将像素聚集体分类为胰岛素颗粒。颗粒核心和光环被独立分类,并通过将颗粒光晕与核心候选对象的凸差相交而融合在一起。一旦融合,就获得了总的和单独的颗粒面积以及与β细胞质膜的距离度量。该算法为在不同实验条件下确定胰腺β细胞中的颗粒数,位置和电势梯度提供了一种快速而准确的方法。

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