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Toxicity Prediction in Cancer Using Multiple Instance Learning in a Multi-task Framework

机译:多实例学习在多任务框架中使用多实例学习的毒性预测

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Treatments of cancer cause severe side effects called toxicities. Reduction of such effects is crucial in cancer care. To impact care, we need to predict toxicities at fortnightly intervals. This toxicity data differs from traditional time series data as toxicities can be caused by one treatment on a given day alone, and thus it is necessary to consider the effect of the singular data vector causing toxicity. We model the data before prediction points using the multiple instance learning, where each bag is composed of multiple instances associated with daily treatments and patient-specific attributes, such as chemotherapy, radiotherapy, age and cancer types. We then formulate a Bayesian multi-task framework to enhance toxicity prediction at each prediction point. The use of the prior allows factors to be shared across task predictors. Our proposed method simultaneously captures the heterogeneity of daily treatments and performs toxicity prediction at different prediction points. Our method was evaluated on a real-word dataset of more than 2000 cancer patients and had achieved a better prediction accuracy in terms of AUC than the state-of-art baselines.
机译:癌症治疗导致严重的副作用称为毒性。减少这种影响对于癌症护理至关重要。为了影响照顾,我们需要每两周一次预测毒性。这种毒性数据与传统的时间序列数据不同,因为毒性可能是在单独的一天的一次治疗中引起的,因此有必要考虑奇异数据载体引起毒性的影响。我们使用多实例学习在预测点之前模拟数据,其中每个袋子由与日常治疗和患者特异性属性相关的多种情况组成,例如化疗,放射治疗,年龄和癌症类型。然后,我们制定贝叶斯多任务框架,以增强每个预测点的毒性预测。使用前面的使用允许跨任务预测器共享的因素。我们所提出的方法同时捕获日常处理的异质性,并在不同的预测点处对毒性预测进行。我们的方法在2000多个癌症患者的实际数据集上进行了评估,并且在比最先进的基线的角度达到了更好的预测准确性。

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