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Poster: A Novel Hybrid CPU-GPU Generalized Eigensolver for Electronic Structure Calculations Based on Fine Grained Memory Aware Tasks

机译:海报:一种新型混合CPU-GPU广义EIGensolver,用于电子结构计算基于细粒度内存感知任务

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The adoption of hybrid GPU-CPU nodes in traditional supercomputing platforms such as the Cray-XK6 opens acceleration opportunities for electronic structure calculations in materials science and chemistry applications, where medium-sized generalized eigenvalue problems must be solved many times. These eigenvalue problems are too small to scale on distributed systems, but can benefit from the massive compute performance concentrated on a single node, hybrid GPU-CPU system. However, hybrid systems call for the development of new algorithms that efficiently exploit heterogeneity and massive parallelism of not just GPUs, but of multi/many-core CPUs as well. Addressing these demands, we developed a novel algorithm featuring innovative: Fine grained memory aware tasks; Hybrid execution/scheduling, and Increased computational intensity. The resulting eigensolvers are state-of-the-art in HPC, significantly outperforming existing libraries. We describe the algorithm and analyze its performance impact on applications of interest when different fractions of eigenvectors are needed by the host electronic structure code.
机译:在传统的超级计算平台,如的Cray XK6混合GPU-CPU节点的通过开辟了在材料科学和化学应用电子结构计算,其中中型广义特征值问题必须解决很多次加速的机会。这些特征值问题太小是按比例的分布式系统上,但可以从大量的计算性能集中在单个的节点,混合GPU-CPU系统中受益。然而,混合动力系统要求的新算法,有效地利用异质性,而不仅仅是GPU的大规模并行发展,但多核/众核处理器的为好。解决这些需求,我们开发了一种新的算法具有创新:细粒度的内存意识到任务;混合执行/调度,以及增加的计算强度。将所得的特征值求解是国家的最先进的HPC,显著优于现有库。我们描述的算法,当主机电子结构的代码需要特征向量的不同组分分析感兴趣的应用程序性能的影响。

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