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Compressive Sensing Based Hyperspectral Bioluminescent Imaging

机译:基于压缩感测的高光谱生物发光成像

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Bioluminescent Imaging (BLI) is a widely utilised technique for the investigation of biological functions within preclinical biomedical studies. Its aim is to image distributed (biologically informative) visible and near infrared light sources, such as luciferase-tagged cells that are located within a living animal. Images are used to estimate the concentration and spatial distribution of reporters and therefore infer biological activity from measurements taken at the surface of the animal. Quantitative accuracy of the measurements can be improved by considering the highly attenuating and scattering nature of biological tissue, modelling the transport of the light through tissue to tomographically reconstruct a 3D image of the light source within the animal. This accuracy can be improved further by collecting spectral data of the bioluminescent signal. Compressive Sensing (CS) is a method of signal processing that utilises the sparse nature of real-world signals in order for them to be compressed in some domain. This in turn means that a sparse signal of length n can be represented by kn nonzero coefficients with high accuracy. Due to the localisation of bioluminescent sources, which are in sparse in nature, measurements can be collected using a CS based method. This work introduces the development of a CS based hyperspectral bioluminescent imaging system that can be used to collect compressed hyperspectral fluence data of an internal light source at the surface of an animal model. Effects of the number of measurements collected on image reconstruction quality are also investigated.
机译:生物发光成像(BLI)是对临床前生物医学研究中的生物功能研究的广泛利用技术。它的目的是图像分布(生物信息)可见和近红外光源,例如位于活动物内的荧光素酶标记的细胞。图像用于估计记者的浓度和空间分布,从而从动物表面的测量中推断生物活性。通过考虑生物组织的高度衰减和散射性质,可以改善测量的定量精度,通过组织模拟透光通过组织的传输来描绘动物内的光源的3D图像。通过收集生物发光信号的光谱数据,可以进一步提高这种精度。压缩检测(CS)是一种信号处理的方法,其利用现实世界信号的稀疏性质,以便它们在某些域中被压缩。这又意味着长度N的稀疏信号可以由高精度的K N非零系数表示。由于生物发光源的定位,其在自然界稀疏,可以使用基于CS的方法收集测量。该工作介绍了基于CS的高光谱生物发光成像系统的开发,该成像系统可用于收集动物模型表面的内部光源的压缩高光谱注量数据。还研究了在图像重建质量上收集的测量数量的影响。

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