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Complete Genomes of Two Novel Active Prophages Discovered by Bio informatics Methods from High-Throughput Sequencing Data

机译:来自高吞吐量测序数据的生物信息学方法发现的两种新型活跃的预知的完整基因组

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Bacteriophages constitute key gene transfer agents in many bacteria.Specifcally,they may confer gene mobility to Staphylococcus wameri that usually dwells in the skin of human and animals.In this study,we first extracted samples of bacteria from foot skin of foot ulcers sufferers and develop these bacteria.Then,our bioinformatic methods for prophage predicting were applied to the genome sequences of Staphylococcus warneri which are assembly from high-throughput sequencing data.Two novel sequences predicted to encode complete prophages were found in the bacterial genome.Using the inducing agent mitomycin C,we produced phage suspensions.These indeed encompassed the progeny of the two identifed prophages(denoted IME1367_01 and IME1367_02).From high-throughput sequencing data of the suspensions,we obtained the two complete sequence of phage IME1367_01 and IME1367_02.By electron microscopic,we observed these two different phages.The complete genomes of IME1367_01 and ME1367_02 are summited to NCBI:”https://www.ncbi.nlm.nih.gov/nuccore/KY653124.1”&”https://www.ncbi.nlm.nih.gov/nuccor e/KY653121.1”.It will enrich our understanding of the lysogenic phages of Staphylococcus warneri.
机译:噬菌体构成许多细菌中的关键基因转移剂。特异性地,它们可以赋予葡萄球菌的基因流动性,这通常栖息在人类和动物的皮肤中。在本研究中,我们首先从脚溃疡患者患者的脚皮和发展中提取细菌样品。这些细菌。该细菌,我们的生物信息化方法用于预测的葡萄球菌的基因组序列,其是从高通量测序数据组装的组装。在细菌基因组中发现了预测以编码完整的预言的新型序列。诱导剂丝霉素C,我们产生了噬菌体悬浮液。这些确实包括两个识别的前台的后代(表示的IME1367_01和IME1367_02)。从悬浮液的高通量测序数据中,我们获得了两种完整的噬菌体IME1367_01和IME1367_02。用于电子显微镜,我们观察到这两种不同的噬菌体。SUME1367_01和ME1367_02的完整基因组到ncbi:“https://www.ncbi.nlm.nih.gov/nuccore/ky653124.1”&“https://www.ncbi.nlm.nih.gov/nuccor e / ky653121.1”.it将丰富了我们对葡萄球菌的溶血子噬菌体的理解。

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