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Fast iterative image reconstruction using sparse matrix factorization with GPU acceleration

机译:使用GPU加速度使用稀疏矩阵分解的快速迭代图像重建

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Statistically based iterative approaches for image reconstruction have gained much attention in medical imaging. An accurate system matrix that defines the mapping from the image space to the data space is the key to high-resolution image reconstruction. However, an accurate system matrix is often associated with high computational cost and huge storage requirement. Here we present a method to address this problem by using sparse matrix factorization and parallel computing on a graphic processing unit (GPU). We factor the accurate system matrix into three sparse matrices: a sinogram blurring matrix, a geometric projection matrix, and an image blurring matrix. The sinogram blurring matrix models the detector response. The geometric projection matrix is based on a simple line integral model. The image blurring matrix is to compensate for the line-of-response (LOR) degradation due to the simplified geometric projection matrix. The geometric projection matrix is precomputed, while the sinogram and image blurring matrices are estimated by minimizing the difference between the factored system matrix and the original system matrix. The resulting factored system matrix has much less number of nonzero elements than the original system matrix and thus substantially reduces the storage and computation cost. The smaller size also allows an efficient implement of the forward and back projectors on GPUs, which have limited amount of memory. Our simulation studies show that the proposed method can dramatically reduce the computation cost of high-resolution iterative image reconstruction. The proposed technique is applicable to image reconstruction for different imaging modalities, including x-ray CT, PET, and SPECT.
机译:基于统计的图像重建方法在医学成像中获得了很多关注。精确的系统矩阵,其定义从图像空间到数据空间的映射是高分辨率图像重建的关键。然而,精确的系统矩阵通常与高计算成本和巨大的存储要求相关联。在这里,我们通过使用稀疏矩阵分解和图形处理单元(GPU)并行计算来提出一种解决该问题的方法。我们将准确的系统矩阵分为三个稀疏矩阵:模谱模糊矩阵,几何投影矩阵和图像模糊矩阵。模谱模糊矩阵模拟探测器响应。几何投影矩阵基于简单的线路积分模型。由于简化的几何投影矩阵,图像模糊矩阵是补偿响应线(LOR)劣化。通过最小化因子系统矩阵与原始系统矩阵之间的差异来估计几何投影矩阵。由此产生的因子系统矩阵的非零元素数量远远多于原始系统矩阵,因此基本上降低了存储和计算成本。较小的尺寸还允许在GPU上有效的前后投影仪的高效实现,其存储量有限。我们的仿真研究表明,该方法可以大大降低高分辨率迭代图像重建的计算成本。所提出的技术适用于不同成像模式的图像重建,包括X射线CT,PET和SPECT。

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