Efficiency Comparison of Data-Parallel Programming and Message-Passing Paradigm for Molecular Dynamics Simulation

机译：数据并行编程的效率比较和用于分子动力学模拟的数据并行程序传递范例

获取原文

页面导航

摘要
著录项
相似文献
相关主题

摘要

In this paper we compare efficiency results for molecular dynamics simulatons obtained on multiprocessor supercomputers: Convex Exemplar SPP1000/XA and SPP1200/XA, Intel Paragon XP/S and Connection Machine 5 using two approaches - data-parallel programming and message-passing paradigm.

机译：在本文中，我们使用两种方法进行比较在多处理器超级计算机上获得的分子动力学模拟模拟效率结果：凸面示例SPP1000 / XA和SPP1200 / XA，Intel Paragon XP / S和连接机5 - 数据并行编程和消息传递范例。

著录项

来源
《International conference and exhibition on high-performance computing and networking》|1996年||共7页
会议地点
作者
K.Boryczko; J.Kitowski; J.Moscinski;
展开▼
作者单位

展开▼
会议组织
原文格式 PDF
正文语种
中图分类计算机的应用;
关键词

相似文献

外文文献
中文文献
专利

1. Parallel Brownian dynamics simulations with the message-passing and PGAS programming models [J] . Teijeiro C., Sutmann G., Taboada G.L., Computer physics communications . 2013,第4期

机译：带有消息传递和PGAS编程模型的并行布朗动力学仿真
2. HYBRID MESSAGE-PASSING AND SHARED-MEMORY PROGRAMMING IN A MOLECULAR DYNAMICS APPLICATION ON MULTICORE CLUSTERS [J] . Martin J. Choi-ley, Martyn F. Guest, David W. Walker International Journal of High Performance Computing Applications . 2009,第3期

机译：混合动态消息传递和共享内存编程在多族群中的分子动力学应用
3. Molecular dynamics simulations of Ca~(2+) in water: Comparison of a classical simulation including three-body corrections and Born-Oppenheimer ab initio and density functional theory quantum mechanical/molecular mechanics simulations [J] . Christian F.Schwenk, Hannes H.Loeffler, Bernd M.Rode The Journal of Chemical Physics . 2001,第23期

机译：水中Ca〜（2+）的分子动力学模拟：包括三体校正和Born-Oppenheimer从头算和密度泛函理论的量子力学/分子力学模拟的经典模拟的比较
4. Efficiency Comparison of Data-Parallel Programming and Message-Passing Paradigm for Molecular Dynamics Simulation [C] . K.Boryczko, J.Kitowski, J.Moscinski International conference and exhibition on high-performance computing and networking;HPCN Europe 1996 . 1996

机译：分子动力学模拟中数据并行编程和消息传递范例的效率比较
5. Molecular dynamics simulation of organometallic reaction dynamics, and, Enhancing achievement in chemistry for African American students through innovations in pedagogy aligned with supporting assessment and curriculum and integrated under an alternative research paradigm. [D] . Mebane, Sheryl Dee. 2004

机译：有机金属反应动力学的分子动力学模拟，以及通过支持与评估和课程配套的教学法创新，并在替代性研究范式下整合的非裔美国学生，提高化学成就。
6. Nucleotide excision repair of 2-acetylaminofluorene- and 2-aminofluorene-(C8)-guanine adducts: molecular dynamics simulations elucidate how lesion structure and base sequence context impact repair efficiencies [O] . Hong Mu, Konstantin Kropachev, Lihua Wang, 2012

机译：2-乙酰氨基芴-和2-氨基芴-（C8）-鸟嘌呤加合物的核苷酸切除修复：分子动力学模拟阐明了病变结构和碱基序列背景如何影响修复效率
7. 1P581 Improving efficiency of conformation sampling in multicanonical molecular dynamics simulation(27. Molecular dynamics simulation,Poster Session,Abstract,Meeting Program of EABS BSJ 2006) [O] . Tohru Terada, Kentaro Shimizu 2006

机译：1P581改善多甘晶分子动力学模拟中的构象抽样效率（27.分子动力学模拟，海报会话，摘要，EABS和BSJ 2006的会议计划）
8. New shared-memory programming paradigm for molecular dynamics simulations on the Intel Paragon [R] . D'Azevedo, E. F., Romine, C. H. 1994

机译：英特尔paragon上分子动力学模拟的新共享内存编程范例

Efficiency Comparison of Data-Parallel Programming and Message-Passing Paradigm for Molecular Dynamics Simulation

摘要

著录项

相似文献

相关主题

期刊订阅