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Proteomics for Botulism Outbreak Investigations: a Powerful Tool to Track Sources of Intoxication and Commonality of Botulism Outbreaks

机译:BOTULISHISM爆发调查的蛋白质组学:一种追踪醉酒源和BOTULISM爆发的共同性的强大工具

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Botulinum neurotoxin (BoNT) is considered a likely agent for bioterrorism due to its high availability, ease of use, and high toxicity. BoNT is produced by some Clostridia species of bacteria and it consists of seven serotypes, A-G. All BoNTs cleave proteins necessary for nerve transmission, resulting in flaccid paralysis. Epidemiological and laboratory investigation can halt an outbreak of botulism through identification of the source of the contamination. However, some BoNTs are extremely similar in amino acid sequence, making identification of commonalities in BoNT obtained from different samples a difficult task. We have developed a proteomics method to obtain amino acid sequence information on the toxin through enzymatic digest of the toxin followed by online HPLC separation and tandem mass spectrometry. Thousands of MS/MS spectra are obtained in a typical proteomics experiment and the data are largely interpreted with the aid of database searching with some de novo sequencing tools. Through the use of these tools, we can determine the amino acid sequence of the toxin, aiding in epidemiologic or forensic investigations. We present here the results of identification of the toxin from several different botulism outbreaks, some of which can bedifferentiated from other proteins with 99.9% amino acid sequence identity.
机译:由于其高可用性,易用性和高毒性,Botulinum神经毒素(Bont)被认为是生物恐怖主义的可能药剂。怪异是由一些细菌种植的细菌生产,它由七种血清型组成,a-g。所有的故事裂解神经传递所需的蛋白质,导致弛缓性瘫痪。流行病学和实验室调查通过识别污染来源可以阻止肉毒杆菌爆发。然而,在氨基酸序列中,一些讲述在氨基酸序列中非常相似,从而识别来自不同样品的难以获得的困难任务。我们开发了一种蛋白质组学方法,以通过毒素的酶促摘要在网上HPLC分离和串联质谱中获得毒素的氨基酸序列信息。在典型的蛋白质组学实验中获得成千上万的MS / MS光谱,并且数据在很大程度上解释了与一些DE Novo测序工具一起搜索的数据库。通过使用这些工具,我们可以确定毒素的氨基酸序列,辅助流行病学或法医研究。我们在这里展示了来自几种不同的肉毒症爆发的毒素的鉴定结果,其中一些可以从其他蛋白质置于99.9%氨基酸序列同一性。

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