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A PTAS for the Weighted 2-Interval Pattern Problem over the Preceding-and-Crossing Model

机译:前交叉模型中加权2间隔模式问题的PTA

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The 2-Interval Pattern problem over its various models and restrictions was proposed by Vialette for RNA secondary structure prediction, and has attracted a lot of attention from the theoretical computer science community in recent years. In the framework of 2-intervals, the preceding-and-crossing model is an especially interesting model for RNA secondary structures with pseudoknots. In this paper, we present a polynomial time approximation scheme for the Weighted 2-Interval Pattern problem over the preceding-and-crossing model. Our algorithm improves the previous best 2-approximation algorithm, and closes this problem in terms of the approximation ratio.
机译:在其各种模型和限制上提出了2个间隔模式问题,用于RNA二级结构预测,近年来吸引了理论计算机科学界的大量关注。在2间隔的框架中,前交叉模型是RNA二次结构的特别有趣的模型,其具有伪通知。在本文中,我们在前面交叉模型上介绍了用于加权的2间模式问题的多项式时间近似方案。我们的算法改善了先前最好的2近似算法,并根据近似比缩短这个问题。

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