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A Computational Model for Self-assembling Flexible Tiles

机译:自组装柔性瓦片的计算模型

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We present a theoretical model for self-assembling tiles with flexible branches motivated by DNA branched junction molecules. We encode an instance of a "problem" as a pot of such tiles, and a "solution" as an assembled complete complex without any free sticky ends (called ports), whose number of tiles is within predefined bounds. We develop an algebraic representation of this self-assembly process and use it to prove that this model of self-assembly precisely captures NP-computability when the number of tiles in the minimal complete complexes is bounded by a polynomial.
机译:我们为自组装瓷砖提出了一种具有柔性分支的自组装瓷砖,该柔性分支由DNA分枝分子激励。我们将一个“问题”的实例作为这样的瓷砖的锅编码,以及一个“解决方案”作为组装的完整复合物,没有任何自由粘的结束(被称为端口),其数量的瓷砖是在预定义边界内。我们开发了这种自组装过程的代数表示,并用它来证明当最小完全复合物中的瓷砖的数量被多项式界定时,将这种自组装模型精确地捕获NP可计算性。

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