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OBIYagns: A Biochemical Simulator in Grid Environment

机译:obiyagns:网格环境中的生化模拟器

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A computer simulation of mathematical models on cellular biochemical networks has been recognized, as a useful tool for biological researchers to understand the dynamics and regulation mechanism of biochemical behavior and to set up subsequent workinghypotheses for their future experiments. Until now, several programs such as Gepasi, E-Cell, Virtual Cell and GENESIS have been available for such purposes. Mathematical modeling requires a set of parameters (kinetic constants and physiological concentration of the cellular components), however, there are no experimental methods to measure all of such parameters with accuracy. Therefore, estimation of biological parameters based on any observable wet-lab data is essential for construction of the model.And, this estimation process often requires huge computer resources which one organization cannot afford.
机译:已经认识到蜂窝化生物化网络上数学模型的计算机模拟,作为生物研究人员的有用工具,了解生化行为的动态和调节机制,并为其未来的实验设置后续工作体。到目前为止,诸如GEPASI,E-CELL,虚拟小区和创世纪之类的若干节目已用于此目的。数学建模需要一组参数(细胞组分的动力学常数和生理浓度),然而,没有实验方法以准确性测量所有这些参数。因此,基于任何可观察的湿式实验室数据的生物参数估计对于模型的构建至关重要。,这种估计过程通常需要一个组织无法承受的巨额计算机资源。

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