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Automatic Detection and Segmentation of Liver Metastatic Lesions on Serial CT Examinations

机译:在CT系列检查中自动检测和分割肝转移灶

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In this paper we present a fully automated method for detection and segmentation of liver metastases on serial CT examinations (portal phase) given a 2D baseline segmentation mask. Our database contains 27 CT scans, baselines and follow-ups, of 12 patients and includes 22 test cases. Our method is based on the information given in the baseline CT scan which contains the lesion's segmentation mask marked manually by a radiologist. We use the 2D baseline segmentation mask to identify the lesion location in the follow-up CT scan using non-rigid image registration. The baseline CT scan is also used to locate regions of tissues surrounding the lesion and to map them onto the follow-up CT scan, in order to reduce the search area on the follow-up CT scan. Adaptive region-growing and mean-shift segmentation are used to obtain the final lesion segmentation. The segmentation results are compared to those obtained by a human radiologist. Compared to the reference standard our method made a correct RECIST 1.1 assessment for 21 out of 22 test cases. The average Dice index was 0.83 ± 0.07, average Hausdorff distance was 7.85 ± 4.84 mm, average sensitivity was 0.87 + 0.11 and positive predictive value was 0.81 ± 0.10. The segmentation performance and the RECIST assessment results look promising. We are pursuing the methodology further with expansion to 3D segmentation while increasing the dataset we are collecting from the CT abdomen unit at Sheba medical center.
机译:在本文中,我们介绍了一种在串行CT检查(门相位)上检测和分割肝转移的全自动方法,并给出了2D基线分割面罩。我们的数据库包含12例患者的27例CT扫描,基线和随访情况,包括22例测试案例。我们的方法基于基线CT扫描中给出的信息,其中包含由放射科医生手动标记的病变分割蒙版。我们使用2D基线分割蒙版在使用非刚性图像配准的后续CT扫描中识别病变位置。基线CT扫描还用于定位病变周围的组织区域,并将其映射到后续CT扫描上,以减少后续CT扫描上的搜索区域。自适应区域增长和均值移动分割用于获得最终病变分割。将分割结果与人类放射线医师获得的结果进行比较。与参考标准相比,我们的方法对22个测试用例中的21个进行了正确的RECIST 1.1评估。平均Dice指数为0.83±0.07,平均Hausdorff距离为7.85±4.84 mm,平均灵敏度为0.87 + 0.11,阳性预测值为0.81±0.10。分割效果和RECIST评估结果看起来很有希望。我们将进一步扩展到3D分割,同时增加从Sheba医疗中心CT腹部单元收集的数据集,从而进一步追求该方法。

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