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Analysis of grid performance using an Optical Flow algorithm for Medical Image processing

机译:使用光流算法进行医学图像处理的网格性能分析

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The development of bigger and faster computers has not yet provided the computing power for medical image processing required nowadays. This is the result of several factors, including: ⅰ) the increasing number of qualified medical image users requiring sophisticated tools; ⅱ) the demand for more performance and quality of results; ⅲ) researchers are addressing problems that were previously considered extremely difficult to achieve; ⅳ) medical images are produced with higher resolution and on a larger number. These factors lead to the need of exploring computing techniques that can boost the computational power of Healthcare Institutions while maintaining a relative low cost. Parallel computing is one of the approaches that can help solving this problem. Parallel computing can be achieved using multi-core processors, multiple processors, Graphical Processing Units (GPU), clusters or Grids. In order to gain the maximum benefit of parallel computing it is necessary to write specific programs for each environment or divide the data in smaller subsets. In this article we evaluate the performance of the two parallel computing tools when dealing with a medical image processing application. We compared the performance of the EELA-2 (E-science grid facility for Europe and Latin-America) grid infrastructure with a small Cluster (3 nodes × 8 cores = 24 cores) and a regular PC (Intel i3 - 2 cores). As expected the grid had a better performance for a large number of processes, the cluster for a small to medium number of processes and the PC for few processes.
机译:更大,更快的计算机的发展尚未为当今所需的医学图像处理提供计算能力。这是几个因素的结果,包括:ⅰ)越来越多的合格医学图像用户需要复杂的工具; ⅱ)对更多性能和结果质量的需求; ⅲ)研究人员正在解决以前被认为极难解决的问题; ⅳ)医学图像以更高的分辨率和更大的数量产生。这些因素导致需要探索可以提高医疗机构的计算能力并同时保持相对较低成本的计算技术。并行计算是可以帮助解决此问题的方法之一。可以使用多核处理器,多个处理器,图形处理单元(GPU),集群或网格来实现并行计算。为了获得并行计算的最大利益,有必要针对每种环境编写特定的程序或将数据划分为较小的子集。在本文中,我们评估了处理医学图像处理应用程序时两个并行计算工具的性能。我们将EELA-2(欧洲和拉丁美洲的电子科学网格设施)网格基础架构与小型集群(3个节点×8核= 24核)和常规PC(Intel i3-2核)的性能进行了比较。不出所料,网格对于大量进程具有更好的性能,对于中小型进程具有集群,而对于少量进程则具有PC。

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