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Deep Learning Based Cell Imaging with Electrical Impedance Tomography

机译:基于深度学习的电气阻抗断层扫描的细胞成像

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Monitoring the 3-D cell culture process or drug responses non-destructively using Electrical Impedance Tomography (EIT) is an emerging topic in biomedical imaging. Significant efforts have been spent on developing EIT image reconstruction algorithms in order to achieve robust and high-quality cell imaging. The considerable computation time and imperfect image quality are the main issues of these conventional methods whereas the emergence of deep learning techniques point out a new direction due to its fast inferences on object detection, image segmentation and classification. In this paper, a novel deep learning architecture is proposed by adding a fully connected layer before a U-Net structure. This new architecture will first generate an initial guess of the conductivity distribution and then feed it to the following denoising model. A novel initialization strategy is also proposed to further help obtain this initial guess. The performance of the method is verified by simulation and experimental data. The results show that the proposed model outperforms the state-of-the-art EIT algorithms and can generalize well to reconstruct unseen cases consisting of human breast cancer cell pellet.
机译:使用电阻抗断层扫描(EIT)监测3-D细胞培养过程或药物反应是生物医学成像中的新兴主题。在开发EIT图像重建算法上度过了重大努力,以实现鲁棒和高质量的细胞成像。相当大的计算时间和不完美的图像质量是这些传统方法的主要问题,而深入学习技术的出现由于其对象检测,图像分割和分类的快速推断而指出了新方向。在本文中,通过在U-Net结构之前添加完全连接的层来提出一种新的深度学习架构。这个新的架构将首先生成导电性分布的初始猜测,然后将其馈送到以下去噪模型。还提出了一种新颖的初始化策略,以进一步帮助获得这一初步猜测。通过模拟和实验数据验证该方法的性能。结果表明,所提出的模型优于最先进的EIT算法,可以概括为重建由人乳腺癌细胞颗粒组成的看不见的案例。

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