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A Novel CAD System for Detecting Acute Rejection of Renal Allografts Based on Integrating Imaging-markers and Laboratory Biomarkers

机译:基于集成像标记和实验室生物标志物检测肾同种异体移植症急性排斥的新型CAD系统

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The goal of this paper is to determine the parameters that are correlated with the biopsy diagnosis of acute renal rejection (AR) post-transplantation, using laboratory biomarkers and (3D+ -value) diffusion weighted MR (DW-MR) image- markers. 16 patients with non-rejection (NR) and 45 patients with AR renal allografts determined by their renal biopsy as a gold standard were included. All kidneys were evaluated using both laboratory biomarkers (e.g., creatinine clearance (CrCl) and serum creatinine (SCr)) and DW-MR image-markers. To extract the latter, DW-MR kidney images were first segmented using a geometric deformable model, then, DW-MR image-markers known as apparent diffusion coefficients (ADCs), were estimated for segmented kidneys at multiple b-values (i.e. strength and timing, of, the, field, gradients, (b50,b 100,,...,b 1000 s/mm2)). A statistical analysis investigating possible correlations between potential biomarkers of AR and the biopsy diagnosis was firstly performed. Two categories of parameters were mainly examined: (i) laboratory biomarkers (CrCl and SCr) and (ii) the average ADC (aADC) at individual b-values. Analysis of Variance(ANOVA) and the likelihood ratio ($chi^{2}$) tests found that both CrCl and SCr affected significantly the likelihood of AR, as did the aADC for the individual b-values of b 100, b 500, b 600, b 700, and b 900s/ mm2. Nevertheless, patient demographics (i.e. age and sex) and the aADC at the remaining b-values had no significant effect. The statistical analysis results encouraged us to investigate if this can lead to building a computer-aided diagnostic (CAD) system with the ability to classify AR from NR renal allografts. To achieve this goal, stacked auto-encoders (SAEs) based on deep learning approach were trained using the fusion of the statistically significant DW-MR image-markers and laboratory biomarkers for the classification purposes. Preliminary results obtained (92% accuracy, 92% sensitivity, and 94% specificity) hold a lot of promise of the presented technique to be reliably used as a noninvasive post-transplantation diagnostic tool.
机译:本文的目标是确定与移植后急性肾抑制(AR)的活检诊断相关的参数,使用实验室生物标志物和(3D + -Value)扩散加权MR(DW-MR)图像标记。包括肾活检患者为黄金标准的肾脏活检测定的非排斥(NR)和45名患者患者。使用实验室生物标志物(例如,肌酐清除(CRCL)和血清肌酐(SCR))和DW-MR图像标记进行评估所有肾脏。为了提取后者,首先使用几何可变形模型进行DW-MR肾​​脏图像,然后称为表观扩散系数(ADC)的DW-MR图像标记被估计为在多个B值下分段肾(即强度和时序,,,,字段,梯度,(b50,b 100,...,b 1000 s / mm 2 )))。首先进行调查潜在生物标志物与活检诊断的可能相关性的统计分析。主要检查两类参数:(i)实验室生物标志物(CRCL和SCR)和(ii)单个B值的平均ADC(AADC)。方差分析(ANOVA)和似然比($ chi ^ {2} $)测试发现,CRCL和SCR都影响了AR的可能性,如B 100,B 500的单个B值的AADC一样,b 600,b 700和b 900s / mm 2 。然而,患者人口统计学(即年龄和性别)和剩余B值的AADC没有显着影响。统计分析结果鼓励我们调查这是否可以导致构建计算机辅助诊断(CAD)系统,该系统能够从NR肾同种异体移植物中分类AR。为实现这一目标,使用统计上显着的DW-MR图像标记和实验室生物标志物的融合来训练基于深度学习方法的堆叠自动编码器(SAES)进行分类目的。获得的初步结果(精度为92%,灵敏度为92%,94%的特异性)对所提出的技术进行了许多承诺,以可靠地用作非侵入性后移植后诊断工具。

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