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Evaluation of effects of JPEG2000 compression on a computer-aided detection system for prostate cancer on digitized histopathology

机译:评估JPEG2000压缩对前列腺癌计算机辅助检测系统对数字化组织病理学的影响

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A single digital pathology image can occupy over 10 gigabytes of hard disk space, rendering it difficult to store, analyze, and transmit. Though image compression provides a means of reducing the storage requirement, its effects on CAD (and pathologist) performance are not yet clear. In this work we assess the impact of compression on the ability of a CAD system to detect carcinoma of the prostate (CaP) in histological sections. The CAD algorithm proceeds as follows: Glands in the tissue are segmented using a region-growing algorithm. The size of each gland is then extracted and modeled using a mixture of Gamma distributions. A Markov prior (specifically, a probabilistic pairwise Markov model) is employed to encourage nearby glands to share the same class (i.e. cancerous or non-cancerous). Finally, cancerous glands are aggregated into continuous regions using a distance-hull algorithm. We evaluate CAD performance over 12 images compressed at 14 different compression ratios using JPEG2000. Algorithm performance (measured using the under the receiver operating characteristic curves) remains relatively constant for compression ratios up to 1∶256. After this point performance degrades precipitously. We also have an expert pathologist view the compressed images and assign a confidence measure as to their diagnostic fidelity.
机译:单个数字病理图像可能会占用超过10 GB的硬盘空间,从而使其难以存储,分析和传输。尽管图像压缩提供了一种减少存储需求的方法,但是它对CAD(和病理学家)性能的影响尚不清楚。在这项工作中,我们评估了压缩对CAD系统在组织切片中检测前列腺癌(CaP)的能力的影响。 CAD算法的步骤如下:使用区域增长算法对组织中的腺体进行分割。然后提取每个腺体的大小,并使用Gamma分布的混合物进行建模。运用马尔可夫先验(具体来说是概率成对的马尔可夫模型)来鼓励附近的腺体共享相同的类别(即癌变或非癌变)。最后,使用距离-船壳算法将癌性腺聚集成连续区域。我们使用JPEG2000评估以14种不同压缩率压缩的12张图像的CAD性能。对于高达1∶256的压缩率,算法性能(使用接收器的工作特性曲线测量)保持相对恒定。此后,性能将急剧下降。我们还有一位专业的病理学家来查看压缩图像,并为其诊断保真度分配置信度。

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