首页> 外文会议>2010 4th International Conference on Bioinformatics and Biomedical Engineering >A Svm-Based Algorithm for Automatic Species Classification of a Marine Diatom Genus Coscinodiscus Ehrenberg
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A Svm-Based Algorithm for Automatic Species Classification of a Marine Diatom Genus Coscinodiscus Ehrenberg

机译:基于Svm的海洋硅藻属Coscinodiscus Ehrenberg物种自动分类的算法

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Coscinodiscus Ehrenberg is a large and ecologically important diatom genus with plentiful species in marine phytoplankton and with a variety of round shapes and ornamentation. These properties can be measured by computer image pre-segmentation and feature extraction with threshold methods. However,it proves to be complicated task because of the high spatial variability of ornamentation properties. Researchers have shown a Teach-program and a number of library functions operating on sample image lists (SIL''s) and operating on classifiers (CF''s) to solve the problem. In this paper, we present Coscinodiscus Ehrenberg ornamentation classifier algorithm called support vector machines (SVMs) to derive a new set of SIL''s and CF''s. The principal purpose of SVMs is Coscinodiscus Ehrenberg images pattern recognition approach. A pattern is in this context always the SIL''s contained in a sub-rectangle of some given (possibly larger) image. For the same classifier this sub-rectangle must always have the same dimensions, while the query image to be searched may be arbitrarily large. The training is done by preparing SIL''s for the pattern taxa in question and feeding them to CF''s created. Our classifier generation with preprocessing code optimization achieves a AAAAA preprocessing code, a 0.981 learning success, a 100% computational complexity. Train with SIL''s achieves 212 samples, 17 taxa, a 0.472% error rate and Test with Query image searching achieves 253 samples,17 taxa,a 15.81% error rate. The experiments demonstrate that the proposed method is very robust to the threshold segmentation and ornamentation feature extraction of Coscinodiscus Ehrenberg images, and is effective and useful for species classification of Coscinodiscus Ehrenberg.
机译:Coscinodiscus Ehrenberg是一个具有生态重要意义的大型硅藻属,在海洋浮游植物中有丰富的种类,并且具有各种圆形和装饰性。这些属性可以通过计算机图像预分割和使用阈值方法进行特征提取来测量。然而,由于装饰特性的高空间变异性,它被证明是一项复杂的任务。研究人员展示了一个Teach程序和许多在样本图像列表(SIL)和分类器(CF)上运行的库函数来解决该问题。在本文中,我们提出了Coscinodiscus Ehrenberg装饰分类器算法,称为支持向量机(SVM),以得出一组新的SIL和CF。 SVM的主要目的是Coscinodiscus Ehrenberg图像模式识别方法。在这种情况下,图案始终是某些给定(可能更大)图像的子矩形中包含的SIL。对于相同的分类器,此子矩形必须始终具有相同的尺寸,而要搜索的查询图像可能任意大。培训是通过为有问题的模式分类单元准备SIL并将它们提供给创建的CF来完成的。我们的分类器生成具有预处理代码优化功能,可实现AAAAA预处理代码,0.981学习成功和100%的计算复杂性。使用SIL进行训练可达到212个样本,17个分类单元,0.472%的错误率,而使用查询图像搜索进行测试可实现253个样本,17个分类单元,15.81%的错误率。实验表明,该方法对Coscinodiscus Ehrenberg图像的阈值分割和装饰特征提取具有很好的鲁棒性,对Coscinodiscus Ehrenberg的物种分类是有效和有用的。

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