首页> 外文会议>2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology >Functional data classification for temporal gene expression data with kernel-induced random forests
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Functional data classification for temporal gene expression data with kernel-induced random forests

机译:具有内核诱导的随机森林的时态基因表达数据的功能数据分类

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Scientists and others today often collect samples of curves and other functional data. The multivariate data classification methods cannot be directly used for functional data classification because the curse of dimensionality and difficulty in taking in account the correlation and order of functional data. We extend the kernel-induced random forest method for discriminating functional data by defining kernel functions of two curves. This method is demonstrated by classifying the temporal gene expression data. The simulation study and applications show that the kernel-induced random forest method increases the classification accuracy from the available methods. The kernel-induced random forest method is easy to implement by naive users. It is also appealing in its flexibility to allow users to choose different curve estimation methods and appropriate kernel functions.
机译:今天的科学家和其他人经常收集曲线和其他功能数据的样本。多元数据分类方法不能直接用于功能数据分类,因为维数的诅咒和难以考虑功能数据的相关性和顺序。通过定义两条曲线的核函数,我们扩展了核诱导的随机森林方法来区分功能数据。通过对时间基因表达数据进行分类证明了该方法。仿真研究和应用表明,基于核的随机森林方法从可用方法中提高了分类精度。内核诱发的随机森林方法很容易被天真的用户实现。它的灵活性也很吸引人,它允许用户选择不同的曲线估计方法和适当的内核功能。

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