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Cardiac MR Segmentation from Undersampled k-space Using Deep Latent Representation Learning

机译:使用深潜表示学习从欠采样k空间进行心脏MR分割

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Reconstructing magnetic resonance imaging (MRI) from undersampled k-space enables the accelerated acquisition of MRI but is a challenging problem. However, in many diagnostic scenarios, perfect reconstructions are not necessary as long as the images allow clinical practitioners to extract clinically relevant parameters. In this work, we present a novel deep learning framework for reconstructing such clinical parameters directly from undersampled data, expanding on the idea of application-driven MRI. We propose two deep architectures, an end-to-end synthesis network and a latent feature interpolation network, to predict cardiac segmentation maps from extremely undersampled dynamic MRI data, bypassing the usual image reconstruction stage altogether. We perform a large-scale simulation study using UK Biobank data containing nearly 1000 test subjects and show that with the proposed approaches, an accurate estimate of clinical parameters such as ejection fraction can be obtained from fewer than 10 k-space lines per time-frame.
机译:从欠采样的k空间重建磁共振成像(MRI)可以加快MRI的采集速度,但是这是一个具有挑战性的问题。但是,在许多诊断方案中,只要图像允许临床医生提取临床相关参数,就无需进行完美的重建。在这项工作中,我们提出了一种新颖的深度学习框架,用于直接从欠采样数据中重建此类临床参数,并扩展了应用驱动MRI的思想。我们提出了两种深层架构,即端到端合成网络和潜在特征插值网络,以从极度欠采样的动态MRI数据中预测心脏分割图,从而完全绕开了通常的图像重建阶段。我们使用包含近1000个测试对象的UK Biobank数据进行了大规模的模拟研究,结果表明,通过提出的方法,每时帧可从少于10 k个空间线中获得对临床参数(如射血分数)的准确估计。

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