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Assessment of Bioaerosol Sampling Techniques for Viable Acinetonacter baumannii by Propidium Monoazide Quantitative PCR

机译:单叠氮化丙锭定量PCR对活的鲍曼不动杆菌的生物气溶胶采样技术的评估

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Background Acinetobacter baumannii is a Gram-negative coccobacillus, which is frequently associated with nosocomial infections worldwide. Since the introduction of antibiotics, A. baumannii has increased its resistance to broad-spectrum antibiotics and has thus become problematic in intensive care units (ICUs). Although A. baumannii is known to be transmitted by close contact with infected persons, some evidence suggests that airborne dispersal and transmission may also be important. Aims The purpose of this study is to establish the method by using PMA combined with real-time PCR (PMA-qPCR) for rapidly getting the concentration of airborne A. baumannii. Methods The Propidium Monoazide (PMA) is a nucleic acid dye which would be combined with Real-time PCR to determine the viability of bacteria by identifying the integrity of cell membrane. Results We established the method by using PMA-qPCR to detect A. baumannii in the air of our chamber. The PMA concentration used in this study is 10 μg/ml combined with a 500W light irradiation for 3 minutes. Based on the viability test, a linear relationship was observed between culture based method and PMA-qPCR (R=0.99). Consequently, PMA-qPCR has the potential to identify the viability of A. baumannii. The collection efficiency of bioaerosol sampler was evaluated by two parameters in this study; Culturability recovery (CR) and Viability recovery (VR). CR and VR were determined by the culture and PMA-qPCR method, respectively. Our results demonstrated Biosampler and AGI-30 have a batter performance in sampling airborne A. baumannii than the Nuclepore filter, no matter CR or VR was evaluated. Moreover, the stability of PMA binding samples were also evaluated when the samples were stored at refrigerated temperature. Once PMA is binding with A. baumannii DNA, the stability of the DNA bindings was observed to be stable up to 28 days. Conclusions Our study demonstrated PMA-qPCR may be a meaningful method for airborne A. baumannii aerosol detection.
机译:背景鲍曼不动杆菌是革兰氏阴性球菌,在世界范围内经常与医院感染有关。自引入抗生素以来,鲍曼不动杆菌提高了其对广谱抗生素的抗性,因此在重症监护病房(ICU)中成为问题。尽管已知鲍曼不动杆菌是通过与感染者密切接触而传播的,但一些证据表明,空气传播和传播也很重要。目的本研究的目的是建立结合PMA与实时PCR(PMA-qPCR)的方法,以快速获取空气中鲍曼不动杆菌的浓度。方法单叠氮丙锭(PMA)是一种核酸染料,可与实时PCR结合使用,通过鉴定细胞膜的完整性来确定细菌的生存力。结果我们建立了使用PMA-qPCR检测房间空气中鲍曼不动杆菌的方法。本研究中使用的PMA浓度为10μg/ ml,并结合500W的光照射3分钟。基于生存力测试,在基于培养物的方法与PMA-qPCR之间观察到线性关系(R = 0.99)。因此,PMA-qPCR有潜力鉴定鲍曼不动杆菌的生存能力。本研究通过两个参数评估了生物气溶胶采样器的采集效率。可培养性恢复(CR)和生存力恢复(VR)。 CR和VR分别通过培养和PMA-qPCR方法确定。我们的结果表明,无论对CR或VR进行评估,Biosampler和AGI-30在采样空气传播的鲍曼不动杆菌时均具有比Nuclepore过滤器更高的面糊性能。此外,当样品在冷藏温度下保存时,还评估了PMA结合样品的稳定性。一旦PMA与鲍曼不动杆菌DNA结合,就可以观察到DNA结合的稳定性在长达28天的时间内都是稳定的。结论我们的研究表明PMA-qPCR可能是一种对机载鲍曼不动杆菌气溶胶检测的有意义的方法。

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