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Isogeometric Overlapping Additive Schwarz Solvers for the Bidomain System

机译:异诊室重叠的添加剂施瓦茨索尔索尔斯(Bidomain系统)

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The electrical activity of the heart is a complex phenomenon strictly related to its physiology, fiber structure and anatomy. At the cellular level the cell membrane separates both the intra- and extracellular environments consisting of a dilute aqueous solution of dissolved salts dissociated into ions. Differences in ion concentrations on opposite sides of the membrane lead to a voltage called the transmembrane potential, v_M, defined as the difference between the intra- and extracellular potentials, (u_I and u_E). The bioelectric activity of a cardiac cell is described by the time course of v_M, the so called action potential. At the tissue level the most complete mathematical model of cardiac electrophysi-ology is the Bidomain model, consisting of a degenerate reaction-diffusion system of a parabolic and an elliptic partial differential equation modelling v_m and u_E of the anisotropic cardiac tissue, coupled nonlinearly with a membrane model. The multiscale nature of the Bidomain models yields very high computational costs for its numerical resolution. The starting point for a spatial discretization is a geometrical representation that encompasses the required anatomical and structural details, and that is also suitable for computational studies. Detailed models were proposed based on structured grids with cubic Hermite interpolation functions, which enable a smooth representation of ventricular geometry with relatively few elements, see e.g. . In this study we used an alternative approach based on Isogeometric Analysis (IGA), a novel method for the discretization of partial differential equations introduced in. This method adopts the same spline or Non-Uniform Rational B-spline (NURBS) basis functions used to design domain geometries in CAD to construct both trial and test spaces in the discrete variational formulation of the differential problem, and provides a higher control on the regularity of the discrete space. The IGA discretization of the Bidomain model in space and semi-implicit (IMEX) finite differences in time lead to the resolution at each time step of a large and very ill-conditioned linear system. Since the iteration matrix is symmetric semidefinite, it is natural to use the preconditioned conjugate gradient method.
机译:心脏的电活动是一种复杂的现象,严格与其生理学,纤维结构和解剖学相关。在细胞水平下,细胞膜将由稀释的盐水溶液组成的内细胞和细胞内环境分离成离子。离子浓度对膜的相对侧的差异导致称为跨膜电位,V_m的电压,定义为内部和细胞外电位之间的差异(U_i和U_E)。通过V_M的时间过程描述了心电池的生物电活动,所谓的动作电位。在组织级别,心脏电泳的最完整的数学模型是双胞瘤模型,由抛物线的退化反应扩散系统和各向异性心脏组织的椭圆局部微分方程模拟V_M和U_E的求差,与a膜模型。 Bidomain模型的多尺度性质为其数值分辨率产生了非常高的计算成本。空间离散化的起点是几何表示,其包括所需的解剖结构和结构细节,并且也适用于计算研究。基于结构化网格提出了具有立方Hermite插值功能的详细模型,其使心室几何形状的平滑表示具有相对较少的元素,参见例如。 。在该研究中,我们使用了一种基于异步测定分析(IGA)的替代方法,这是一种新的方法,用于离散化的偏微分方程。该方法采用相同的花键或非均匀的RationAtrationB样条(NURBS)基函数用于CAD中的设计域几何形状,在差分问题的离散变分制剂中构建试验和测试空间,并对离散空间的规律性提供更高的控制。在空间和半隐式(IMEX)的平坦族模型的IGA离散化有限差异导致大型和非常不良的线性系统的每次步骤的分辨率。由于迭代矩阵是对称的半纤维,因此使用预处理的共轭梯度方法是自然的。

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