首页> 外文会议>International conference on simulation and modelling in the food and bio-industry >A DATA MINING APPROACH TO CHARACTERIZE AMANITA PONDEROSA MUSHROOMS USING INORGANIC PROFILE AND M13-PCR MOLECULAR DATA
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A DATA MINING APPROACH TO CHARACTERIZE AMANITA PONDEROSA MUSHROOMS USING INORGANIC PROFILE AND M13-PCR MOLECULAR DATA

机译:利用无机特征和M13-PCR分子数据表征鹅膏菌蓬头菌的数据挖掘方法

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Wild eatable mushrooms Amanita ponderosa are very appreciated in gastronomy, showing high export potential. This specie grows spontaneously in some microclimates, namely in the southwest of the Iberian Peninsula. The aim of this study is to find inorganic and molecular markers that allow to characterize the wild A. ponderosa strains collected from different geographical locations in the Iberian Peninsula. Molecular approach using the microsatellite primer M13-PCR allowed to distinguish the mushrooms at specie level and to differentiate the A. ponderosa strains according to their location. Data mining tools were used in order to correlate inorganic and molecular results. A. ponderosa strains showed different inorganic composition according to their habitat. It was developed a segmentation model based on the molecular analysis, which allow relating the clusters obtained with the geographical site of sampling. There were also developed explanatory models of the segmentation, using decision trees, by following two different strategies. One of them based on the bands of DNA and, the other one, based on the mineral composition. The results show that it may be possible to relate the molecular and inorganic data. The present findings are wide potential application and both health and economical benefits arise from this study.
机译:野生食用蘑菇鹅膏鹅膏在美食界非常受欢迎,显示出很高的出口潜力。该物种在一些微气候中自发生长,即在伊比利亚半岛的西南部。这项研究的目的是找到能够表征从伊比利亚半岛不同地理位置收集的野生黄曲霉菌株的无机和分子标记。使用微卫星引物M13-PCR的分子方法可以在菌种水平上区分蘑菇,并根据它们的位置区分黄曲霉菌株。为了关联无机和分子结果,使用了数据挖掘工具。根据它们的生境,美国黄松菌株显示出不同的无机组成。它基于分子分析开发了一个分割模型,该模型允许将获得的簇与采样的地理位置相关联。还通过遵循两种不同的策略,使用决策树开发了细分化的解释模型。其中一个基于DNA条带,另一个基于矿物质成分。结果表明,可能将分子和无机数据联系起来。目前的发现具有广泛的潜在应用前景,这项研究既带来健康益处,也带来经济利益。

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