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Lung Structures Enhancement in Chest Radiographs via CT Based FCNN Training

机译:通过基于CT的FCNN训练增强胸部X光片的肺结构

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The abundance of overlapping anatomical structures appearing in chest radiographs can reduce the performance of lung pathology detection by automated algorithms (CAD) as well as the human reader. In this paper, we present a deep learning based image processing technique for enhancing the contrast of soft lung structures in chest radiographs using Fully Convolutional Neural Networks (FCNN). Two 2D FCNN architectures were trained to accomplish the task: The first performs 2D lung segmentation which is used for normalization of the lung area. The second FCNN is trained to extract lung structures. To create the training images, we employed Simulated X-Ray or Digitally Reconstructed Radiographs (DRR) derived from 516 scans belonging to the LIDC-IDRI dataset. By first segmenting the lungs in the CT domain, we are able to create a dataset of 2D lung masks to be used for training the segmentation FCNN. For training the extraction FCNN, we create DRR images of only voxels belonging to the 3D lung segmentation which we call "Lung X-ray" and use them as target images. Once the lung structures are extracted, the original image can be enhanced by fusing the original input x-ray and the synthesized "Lung X-ray". We show that our enhancement technique is applicable to real x-ray data, and display our results on the recently released NIH Chest X-Ray-14 dataset. We see promising results when training a DenseNet-121 based architecture to work directly on the lung enhanced X-ray images.
机译:胸部X光片中出现的大量重叠解剖结构会降低通过自动算法(CAD)以及人类阅读器进行的肺部病理学检测的性能。在本文中,我们提出了一种基于深度学习的图像处理技术,用于使用全卷积神经网络(FCNN)增强胸部X线照片中软肺结构的对比度。训练了两种2D FCNN架构来完成任务:第一种执行2D肺分割,用于肺区域的标准化。训练第二个FCNN以提取肺部结构。为了创建训练图像,我们使用了模拟X射线或数字重建射线照相(DRR),该射线照相是从属于LIDC-IDRI数据集的516次扫描得出的。通过首先在CT域中分割肺部,我们能够创建2D肺罩数据集,用于训练分割FCNN。为了训练提取FCNN,我们仅创建属于3D肺分割的体素的DRR图像,我们将其称为“肺部X射线”,并将其用作目标图像。一旦提取了肺部结构,就可以通过融合原始的输入X射线和合成的“肺X射线”来增强原始图像。我们证明了我们的增强技术适用于真实的X射线数据,并在最近发布的NIH Chest X-Ray-14数据集上显示了我们的结果。当训练基于DenseNet-121的架构直接在肺部增强的X射线图像上工作时,我们看到了可喜的结果。

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