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Super Resolution of Cardiac Cine MRI Sequences Using Deep Learning

机译:使用深度学习对心脏电影MRI序列进行超分辨率

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Cardiac cine MRI facilitates structural and functional analysis of the heart through the dynamic aspect of the sequences. Clinical acquisitions consist of sparse 2D images instead of 3D volumes, taken at landmark points of the ECG to cover the whole heartbeat. A stack of short axis images and a small number of long axis views are generally acquired. Efforts have been made to accelerate acquisitions at the acquisition stage as well as at post-processing. A major part of current research in medical image processing focuses on deep learning approaches driven by large datasets. However, most of those methods leave out the dynamic aspect of temporal data and treat frames of cine MRI sequences individually. We propose a super resolution network based on the U-net and long short-term memory layers to exploit the temporal aspect of the dynamic cardiac cine MRI data. When given a sequence of low resolution long axis images, our method is able to render a high resolution sequence. Results on synthetic data simulating a stack of short axis images show quantitative and qualitative improvements over traditional interpolation methods or the equivalent machine learning method using a single frame, including the ability of the network to recover important image features such as the apex.
机译:心脏磁共振MRI通过序列的动态方面促进心脏的结构和功能分析。临床采集包括在ECG的标志性点拍摄的稀疏2D图像而不是3D体积,以覆盖整个心跳。通常获取一堆短轴图像和少量长轴视图。在收购阶段以及后期处理方面已经努力加快收购速度。当前医学图像处理研究的主要内容集中在大型数据集驱动的深度学习方法上。但是,大多数这些方法都忽略了时间数据的动态方面,并单独处理了电影MRI序列的帧。我们提出了一个基于U-net和长短期记忆层的超分辨率网络,以利用动态心脏电影MRI数据的时间方面。当给出一系列低分辨率的长轴图像时,我们的方法能够渲染高分辨率的序列。模拟一堆短轴图像的合成数据结果显示,与传统插值方法或使用单帧的等效机器学习方法相比,该方法在数量和质量上都有改进,包括网络恢复重要图像特征(如顶点)的能力。

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