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Deep learning of contrast-coated serrated polyps for computer-aided detection in CT colonography

机译:对比涂层锯齿状息肉的深度学习,用于CT结肠造影中的计算机辅助检测

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Serrated polyps were previously believed to be benign lesions with no cancer potential. However, recent studies have revealed a novel molecular pathway where also serrated polyps can develop into colorectal cancer. CT colonography (CTC) can detect serrated polyps using the radiomic biomarker of contrast coating, but this requires expertise from the reader and current computer-aided detection (CADe) systems have not been designed to detect the contrast coating. The purpose of this study was to develop a novel CADe method that makes use of deep learning to detect serrated polyps based on their contrast-coating biomarker in CTC. In the method, volumetric shape-based features are used to detect polyp sites over soft-tissue and fecal-tagging surfaces of the colon. The detected sites are imaged using multi-angular 2D image patches. A deep convolutional neural network (DCNN) is used to review the image patches for the presence of polyps. The DCNN-based polyp-likelihood estimates are merged into an aggregate likelihood index where highest values indicate the presence of a polyp. For pilot evaluation, the proposed DCNN-CADe method was evaluated with a 10-fold cross-validation scheme using 101 colonoscopy-confirmed cases with 144 biopsy-confirmed serrated polyps from a CTC screening program, where the patients had been prepared for CTC with saline laxative and fecal tagging by barium and iodine-based diatrizoate. The average per-polyp sensitivity for serrated polyps >6 mm in size was 93±7% at 0.8±1.8 false positives per patient on average. The detection accuracy was substantially higher that of a conventional CADe system. Our results indicate that serrated polyps can be detected automatically at high accuracy in CTC.
机译:以前认为锯齿状息肉是无癌的良性病变。但是,最近的研究揭示了一种新颖的分子途径,其中锯齿状息肉也可以发展成结肠直肠癌。 CT结肠造影(CTC)可以使用造影剂涂层的放射性生物标记物来检测锯齿状息肉,但这需要阅读器的专业知识,并且当前的计算机辅助检测(CADe)系统还没有被设计来检测造影剂涂层。这项研究的目的是开发一种新颖的CADe方法,该方法利用深度学习基于CTC中的对比涂层生物标记物来检测锯齿状息肉。在该方法中,基于体积形状的特征用于检测结肠软组织和粪便标签表面上的息肉部位。使用多角度2D图像块对检测到的位置成像。深度卷积神经网络(DCNN)用于检查图像斑块中是否存在息肉。基于DCNN的息肉可能性估计值合并到一个聚集似然指数中,其中最高值指示息肉的存在。为了进行初步评估,使用10倍交叉验证方案对拟议的DCNN-CADe方法进行了评估,该方案使用了来自CTC筛查程序的101例经结肠镜确认的病例和144例经活检确认的锯齿状息肉,其中患者已准备好使用盐水进行CTC钡和碘基泛影素标记通便和排便。大于6 mm的锯齿状息肉的平均每息肉敏感性为93±7%,每位患者的假阳性平均为0.8±1.8。检测精度大大高于常规CADe系统。我们的结果表明,在CTC中可以自动检测到锯齿状息肉。

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