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Two- and three-dimensional quantitative image analysis of coronary arteries from high-resolution histological sections

机译:高分辨率组织切片对冠状动脉的二维和三维定量图像分析

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Abstract: The study of coronary arteries has evolved from examining gross anatomy and morphology to scrutinizing micro-anatomy and cellular composition. Technological advances such as high-powered digital microscopes and high precision cutting devices have allowed clinicians to examine coronary artery morphology and pathology at micron resolution. Our work explores the composition of normal coronary arteries in order to provide the foundation for further study of remodeled tissue. The first of two coronary arteries was sliced into 442 sections with 4 micron inter-slice spacing. Each slice was stained for elastin and collagen. The second coronary artery was sectioned into 283 slices, also with 4 micron resolution. These slices were stained for cellular nuclei and smooth muscle. High sectioned into 283 slices, also with 4 micron resolution. These slices were stained for cellular nuclei and smooth muscle. High resolution light microscopy was used to image the sections. The data was analyzed for collagen/elastin content and nuclei density, respectively. Processing of this type of data is challenging in the areas of segmentation, visualization and quantification. Segmentation was confounded by variation in image quality as well as complexity of the coronary tissue. These problems were overcome by the development of 'smart' thresholding algorithms for segmentation. In addition, morphology and image statistics were used to further refine the result of the segmentation. Specificity/sensitivity analysis suggests that automatic segmentation can be very effective. 3D visualization of coronary arteries is challenging due to multiple tissue layers. Method such as summed voxel projection and maximum intensity projection appear to be effective. Shading methods also provide adequate visualization, however it is important to incorporate combined 2D and 3D displays. Surface rendering techniques are useful tools for visualizing parametric data. Quantification in 3D is simple in practice but appropriate descriptions of these results must be displayed to clinicians in a clear way. Preliminary results are promising, but continued development of algorithms for processing histological data is needed. !9
机译:摘要:冠状动脉的研究已从检查总体解剖结构和形态演变为仔细研究微观解剖结构和细胞组成。大功率数码显微镜和高精度切割设备等技术进步使临床医生能够以微米分辨率检查冠状动脉的形态和病理。我们的工作探索正常冠状动脉的组成,以便为进一步研究重塑组织提供基础。将两个冠状动脉中的第一个切成442个切片,切片间距为4微米。每个切片都针对弹性蛋白和胶原蛋白染色。将第二冠状动脉切成283切片,分辨率也为4微米。对这些切片进行细胞核和平滑肌染色。高切成283片,也具有4微米的分辨率。对这些切片进行细胞核和平滑肌染色。使用高分辨率光学显微镜对切片进行成像。分别分析数据的胶原蛋白/弹性蛋白含量和细胞核密度。在细分,可视化和量化领域,处理此类数据具有挑战性。分割因图像质量的变化以及冠状动脉组织的复杂性而混淆。通过开发用于分割的“智能”阈值算法克服了这些问题。此外,使用形态学和图像统计数据进一步细化了分割结果。特异性/敏感性分析表明,自动分割可能非常有效。由于多个组织层,冠状动脉的3D可视化具有挑战性。诸如总体素投影和最大强度投影之类的方法似乎是有效的。阴影方法还可以提供足够的可视化效果,但是将2D和3D组合显示结合起来很重要。表面渲染技术是用于可视化参数数据的有用工具。实际上,以3D进行量化很简单,但是必须以清晰的方式向临床医生显示这些结果的适当描述。初步结果令人鼓舞,但是需要继续开发用于处理组织学数据的算法。 !9

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