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Use of Fatty Acid Profiles To Identify White-Rot Wood Decay Fungi

机译:使用脂肪酸谱鉴定白腐烂木腐真菌

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Identification libraries have been created for the white-rot fungi Phanerochaete chrysosporium, P. sordida , P. sanguinea, Trametes versicolor, T. hirsuta, and T. pubescens. Libraries were compiled using five to ten isolates of each species with each isolate cultured four times, extracted in duplicate and analyzed by gas chromatography for its fatty acid methyl ester (FAME) profile. Single libraries were created for T. versicolor and T. pubescens, indicating that all isolates of these species clustered as a single species. More than one library was created for P. chrysosporium, P. sordida, and T. hirsuta, indicating that not all isolates of these species clustered as a single species. The P. chrysosporium libraries provided a good identification of all but one blind sample. Analysis of that sample identified P. sordida as first choice, but the second choice of P. chrysosporium was too close for a good species match. The genus Phanerochaete was correctly identified in all blind samples for both species tested. Blind samples of T. pubescens and T. hirsuta were not distinguished at the species level. There appears to be considerable variability within T. hirsuta. It will be interesting in the future to compare the DNA sequences of these outliers to determine if the genetic information supports the separations seen in the FAME profiles.
机译:已经为白腐真菌Phanerochaete chrysosporium,P。sordida,P。sanguinea,Trametes versicolor,T。hirsuta和T. pubescens创建了识别库。使用每个物种的五到十个分离株编译文库,每个分离株培养四次,一式两份提取并通过气相色谱分析其脂肪酸甲酯(FAME)谱。为云芝和毛竹创建了单个文库,表明这些物种的所有分离物都聚集为一个物种。为金孢假单胞菌,体育假单胞菌和hirsuta假单胞菌创建了一个以上的文库,这表明并非所有这些物种的分离株都聚集为一个物种。 P. chrysosporium库提供了一个盲样品的良好鉴定。对那个样品的分析确定了P. sordida是第一选择,但是第二选择的P. chrysosporium距离太近了,无法实现良好的物种匹配。在测试的两个物种的所有盲样品中都正确地识别了Phanerochaete属。在物种水平上,没有区分T. pubescens和T. hirsuta的盲样品。 T. hirsuta内似乎存在很大的变异性。将来,比较这些异常值的DNA序列以确定遗传信息是否支持FAME谱中的分离将是很有意思的。

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