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METHODS AND PROCESSES FOR NON-INVASIVE ASSESSMENT OF GENETIC VARIATIONS

机译:对遗传变异的非侵入性评估的方法和过程

摘要

The present invention relates to a computer-implemented method for detecting the presence or absence of a segmental chromosomal aberration or a fetal aneuploidy or both comprising: (a) obtaining sequence reads of circulating, cell-free sample nucleic acid from a test subject; (b) mapping the sequence reads obtained in (a) to a known genome, which known genome has been divided into genomic sections; (c) counting the mapped sequence reads within the genomic sections; (d) removing counts associated with one or more filtered genomic sections, wherein the one or more filtered genomic sections are selected according to one or more criteria chosen from measure of error, genomic sections with redundant mapped sequence reads, genomic sections with uninformative data, genomic sections with overrepresented sequences, genomic sections with underrepresented sequences, and noisy data; (e) generating a sample normalized count profile by normalizing the counts for the genomic sections; and (f) determining the presence or absence of a segmental chromosomal aberration or a fetal aneuploidy or both from the sample normalized count profile in (e).
机译:本发明涉及一种用于检测节段染色体像差或胎儿非倍性或两者的计算机实施方法,包括:(a)从测试受试者获得循环的无细胞样品核酸的序列读数; (b)将(a)中获得的序列读数映射到已知基因组,该基因组已被分为基因组部分; (c)计数基因组部分内的映射序列读取; (d)除去与一个或多个过滤的基因组部分相关的计数,其中根据从误差测量的一个或多个标准,具有冗余映射序列的基因组部分读取的基因组部分,具有未经信息数据的基因组部分的基因组部分来选择所述一种或多种过滤的基因组部分。基因组部分具有超级陈述序列,基因组部分具有不足的序列和噪声数据; (e)通过归一化基因组部分的计数来产生样品归一化计数概况; (f)确定节段性染色体畸变或胎儿非倍差或胎儿非稀释度或两者的存在或不存在(e)中的样品归一化计数谱。

著录项

  • 公开/公告号EP3922731A3

    专利类型

  • 公开/公告日2022-01-05

    原文格式PDF

  • 申请/专利权人 SEQUENOM INC.;

    申请/专利号EP20210182355

  • 申请日2012-10-05

  • 分类号G16B20;C12Q1/6827;G16B20/20;G16B30/10;G16B30/20;G16B40;

  • 国家 EP

  • 入库时间 2022-08-24 23:13:44

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