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MOLECULAR OMICS DATA STRUCTURE IMPLEMENTATION METHOD BASED ON DATA INDEPENDENT ACQUISITION MASS SPECTRUM

机译:基于数据独立采集质谱的分子OMICS数据结构实现方法

摘要

The present invention relates to the technical field of biomolecular omics mass spectrum data, and particularly relates to a molecular omics data structure implementation method based on a data independent acquisition (DIA) mass spectrum. The mass spectrum data structure is DIA tensor (DIAT) data generated from original mass spectrum data, and has three dimensions of attributes: the first dimension is a cycle index, the second dimension is a fragment ion mass-to-charge ratio, and the third dimension is a precursor ion window index corresponding to a fragment ion. The DIAT data according to the present application has high integrity, is easy to read, and has a fast reading speed. The size of a DIAT file is only a few tenths of an mzXML file. By means of a visualized pooled DIAT file image, the DIA mass spectrum data can be directly observed, and a DIAT can be directly analyzed by using a visual processing algorithm, thereby avoiding the operation of extracting ion chromatographic peaks with a large amount of calculation. Moreover, a computer deep learning model for clinical sample classification can be directly established according to the file.
机译:本发明涉及基于数据独立获取(DIA)质谱的分子OMICS质谱数据技术领域,尤其涉及基于数据独立获取(DIA)质谱的分子常规数据结构实现方法。质谱数据结构是从原始质谱数据产生的DIA张量(DIAT)数据,并且具有三维属性:第一尺寸是循环指数,第二尺寸是片段离子质量与电荷比,并且第三尺寸是对应于片段离子的前体离子窗口指数。根据本申请的DIAT数据具有高完整性,易于读取,并且具有快速的读取速度。 DIAT文件的大小仅为MZXML文件的几十个。通过可视化的汇集的DIAT文件图像,可以直接观察到DIA质谱数据,并且可以通过使用视觉处理算法直接分析DIAT,从而避免用大量计算提取离子色谱峰的操作。此外,可以根据文件直接建立一种用于临床样本分类的计算机深度学习模型。

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