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Data correction, normalization and validation for quantitative high-throughput metabolomic profiling

机译:定量校正高通量代谢组学谱的数据校正,归一化和验证

摘要

Metabolomic profiling of a biological sample using a separation-molecular ID process, such as gas chromatography-mass spectrometry (“GC-MS”), requires the derivatization of the original sample. Quantitative GC-MS metabolomics is possible if the derivative is in one-to-one proportional relationship with the original concentration profile, wherein the proportionality remaining constant among samples. Two types of biases may be introduced into determination of a metabolomic profile to alter these conditions. The first type of bias is produced by a change in the proportionality size between profiles and is corrected by way of an internal standard. The second type of bias may distort the one-to-one relationship and change the proportionality between the profiles to a different fold-extent for each metabolite in a sample. The metabolomic profile data is corrected from these biases to reduce the risk of assigning biological significance to changes due only to chemical kinetics. A data correction and validation strategy provides for a weighted average of metabolite derivatives after derivatization of an original metabolite and before steady state equilibrium is established between plural metabolite derivatives to maintain high-throughput data acquisition and metabolomics analysis.
机译:使用分离分子ID方法(例如气相色谱-质谱法(“ GC-MS”))对生物样品进行代谢组学谱分析需要原始样品的衍生化。如果衍生物与原始浓度曲线呈一一比例关系,则定量GC-MS代谢组学是可能的,其中样品之间的比例保持恒定。可以将两种类型的偏差引入代谢组学谱的确定中以改变这些条件。第一类偏差是由轮廓之间的比例大小变化产生的,并通过内标进行校正。第二种类型的偏倚可能会使一对一的关系发生扭曲,并且将样本之间的每种代谢物之间的分布比例改变为不同的折叠范围。从这些偏差校正了代谢组学谱数据,以降低仅因化学动力学而将生物学意义赋予变化的风险。数据校正和验证策略提供了原始代谢物衍生化之后,多个代谢物衍生物之间建立稳态平衡之前的代谢物衍生物的加权平均值,以维持高通量数据采集和代谢组学分析。

著录项

  • 公开/公告号US2006200316A1

    专利类型

  • 公开/公告日2006-09-07

    原文格式PDF

  • 申请/专利权人 HARIN KANANI;MARIA I. KLAPA;

    申请/专利号US20060362717

  • 发明设计人 HARIN KANANI;MARIA I. KLAPA;

    申请日2006-02-28

  • 分类号G06F19/00;

  • 国家 US

  • 入库时间 2022-08-21 21:44:19

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