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IN SILICO PREDICTION OF ENHANCED NUTRIENT CONTENT IN PLANTS BY METABOLIC MODELLING

机译:代谢模拟在硅中预测植物中增强的营养成分

摘要

The present invention relates to a method for identifying at least one metabolic conversion step, the modulation of which increases the amount of a metabolite of interest in a plant cell, plant or plant part, said method comprising establishing a stoichiometric network model for the metabolism of the plant cell, plant or plant part including the synthesis pathway for the metabolite of interest, identifying at least one candidate metabolic conversion step by applying at least one algorithm of Growth-coupled Design, and validating the at least one candidate metabolic conversion step by a constraint-based modeling approach in the stoichiometric network model, wherein an increase in the metabolite of interest occurring in said constraint-based modeling approach is indicative for a metabolic conversion step, the modulation of which increases the amount of the metabolite of interest in the plant cell, plant or plant part. The present invention further relates to a method for generating a plant cell, plant or plant part which produces an increased amount of a metabolite of interest when compared to a control, said method comprising identifying a metabolic conversion step, the modulation of which increases a metabolite of interest in a plant cell, plant or plant part, by the method for identifying a metabolic conversion step and modulating the said metabolic conversion step such that the amount of the metabolite of interest is increased in vivo in a plant cell, plant or plant part.
机译:本发明涉及一种用于鉴定至少一个代谢转化步骤的方法,该步骤的调节增加了植物细胞,植物或植物部分中目的代谢物的量,所述方法包括建立化学计量网络模型以用于代谢。植物细胞,植物或植物部分,包括目标代谢物的合成途径,通过应用至少一种生长耦合设计算法来识别至少一个候选代谢转化步骤,并通过一种方法验证至少一个候选代谢转化步骤化学计量网络模型中基于约束的建模方法,其中在所述基于约束的建模方法中发生的目标代谢物的增加指示代谢转化步骤,其调节增加了植物中目标代谢物的量细胞,植物或植物的一部分。本发明进一步涉及产生植物细胞,植物或植物部分的方法,当与对照相比时,该植物细胞,植物或植物的部分产生增加量的目的代谢物,所述方法包括鉴定代谢转化步骤,其调节增加代谢物通过鉴定代谢转化步骤并调节所述代谢转化步骤的方法,在植物细胞,植物或植物部分中产生感兴趣的代谢物,从而在体内在植物细胞,植物或植物部分中增加目标代谢产物的量。

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