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Staining quality assessment method and system for in situ hybridization and immunohistochemistry

机译:原位杂交和免疫组织化学染色质量评估方法及系统

摘要

Immunohistochemistry (IHC) and in situ hybridization (ISH) have the purpose of detecting, locating and quantifying certain analytes for various diagnostic purposes. The quality of staining analyzed can vary widely for a variety of reasons. Accordingly, the present invention provides a method and system for assessing staining quality and a method for establishing objective criteria for assessing staining quality and for applications in the field of in situ hybridization and immunohistochemistry. Provide a system. In one possible embodiment, the present invention separates multispectral image data of a tissue specimen to obtain specimen intensity images, each specimen intensity image comprising a signal from one staining, Calculating a metric based on the specimen intensity image, wherein the metric is uniformity, distribution, and / or dispersion of pixel intensity values in the specimen intensity image; and calculating the metric Evaluating the staining quality of a slide by comparing with a predetermined cut-off value for pixel intensity uniformity, distribution, and / or spread, wherein the calculated metric matches the predetermined cut-off value Or if it exceeds, the staining quality of the slide is evaluated as acceptable and the calculated metric is a predetermined cutoff If it does not match with the staining quality of the slide it is evaluated to be unacceptable, and a step. In order to establish objective criteria for assessing staining quality, in one possible embodiment, the method and system described above employs a metric calculated based on the specimen intensity image to determine a predetermined quantification of staining quality. Deriving cut-off values for pixel intensity uniformity, distribution, and / or scatteriness by combining with (pre-established) data. [Selection] Figure 14
机译:免疫组织化学(IHC)和原位杂交(ISH)的目的是为各种诊断目的检测,定位和定量某些分析物。由于各种原因,分析的染色质量可能有很大差异。因此,本发明提供了用于评估染色质量的方法和系统,以及用于建立用于评估染色质量以及用于原位杂交和免疫组织化学领域的客观标准的方法。提供一个系统。在一个可能的实施例中,本发明分离组织样本的多光谱图像数据以获得样本强度图像,每个样本强度图像包括来自一次染色的信号,基于样本强度图像计算度量,其中度量是均匀度,分布和/或样本强度图像中像素强度值的分散;计算度量,通过与用于像素强度均匀性,分布和/或扩展的预定临界值进行比较,评估载玻片的污染质量,其中计算得出的度量与预定临界值相匹配;如果超过,则计算污染将载玻片的质量评估为可接受,并且计算的度量标准为预定的截止值。如果它与载玻片的染色质量不匹配,则将其评估为不可接受,并评估一个步骤。为了建立用于评估染色质量的客观标准,在一个可能的实施例中,上述方法和系统采用基于样本强度图像计算的度量来确定染色质量的预定量化。通过与(预先建立的)数据结合,得出像素强度均匀性,分布和/或散射性的截止值。 [选择]图14

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