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Molecular Dynamics Analysis of Synergistic Effects of Ions and Winter Flounder Antifreeze Protein Adjacent to Ice-Solution Surfaces

机译:冰液表面附近离子和冬季野生抗冻蛋白协同效应的分子动力学分析

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摘要

The control of freezing saline water at the micrometer level has become very important in cryosurgery and cryopreservation of stem cells and foods. Adding antifreeze protein to saline water is a promising method for controlling the freezing because the protein produces a gap between the melting point and the freezing point. Furthermore, a synergistic effect of the solutes occurs in which the freezing point depression of a mixed solution is more noticeable than the sum of two freezing point depressions of single-solute solutions. However, the mechanism of this effect has not yet been clarified. Thus, we have carried out a molecular dynamics simulation on aqueous solutions of winter flounder antifreeze protein and sodium chloride or calcium chloride with an ice layer. The results show that the cations inhibit the hydrogen bond among water molecules not only in the salt solutions but also in the mixed solutions. This inhibition depends on the local number of ions and the valence of cations. The space for water molecules to form the hydrogen bonds becomes small in the case of the mixed solution of the protein and calcium chloride. These findings are consistent with the synergistic effect. In addition, it is found that the diffusion of ions near positively-charged residues is attenuated. This attenuation causes an increase in the possibility of water molecules staying near or inside the hydration shells of the ions. Furthermore, the first hydration shells of the cations become weak in the vicinity of the arginine, lysine and glutamic-acid residues. These factors can be considered to be possible mechanisms of the synergistic effect.
机译:在千分尺水平处对冷冻盐水的控制在冷冻胶和干细胞和食物的冷冻保存中变得非常重要。将防冻蛋白添加到盐水中是一种用于控制冷冻的有希望的方法,因为蛋白质在熔点和冷冻点之间产生间隙。此外,发生溶质的协同效应,其中混合溶液的冷冻点抑制比单溶质溶液的两个冷冻点凹陷的总和更明显。但是,这种效果的机制尚未澄清。因此,我们对冬季野生抗冻蛋白和氯化钠或氯化钙的水溶液进行了分子动力学模拟。结果表明,该阳离子不仅在盐溶液中抑制水分子中的氢键,而且在混合溶液中抑制氢键。这种抑制取决于局部离子数和阳离子的价值。在蛋白质和氯化钙的混合溶液的情况下,形成氢键的水分子的空间变小。这些发现与协同效应一致。另外,发现离子在带正电荷残留物附近的扩散衰减。该衰减导致水分子缓存在离子的水合壳附近或内部的可能性增加。此外,阳离子的第一水合壳在精氨酸,赖氨酸和谷氨酸残基附近变弱。这些因素可以被认为是协同效应的可能机制。

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