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The mitochondrial genome ofAcrobeloides varius(Cephalobomorpha) confirms non-monophyly of Tylenchina (Nematoda)

机译:口腔藻渣瓦氏(CephaloboMorpha)的线粒体基因组证实了Tylenchina(奈戴托)的非单层

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摘要

The infraorder Cephalobomorpha is a diverse and ecologically important nematode group found in almost all terrestrial environments. In a recent nematode classification system based on SSU rDNA, Cephalobomorpha was classified within the suborder Tylenchina with Panagrolaimomorpha, Tylenchomorpha and Drilonematomorpha. However, phylogenetic relationships among species within Tylenchina are not always consistent, and the phylogenetic position of Cephalobomorpha is still uncertain. In this study, in order to examine phylogenetic relationships of Cephalobomorpha with other nematode groups, we determined the complete mitochondrial genome sequence of Acrobeloides varius, the first sequenced representative of Cephalobomorpha, and used this sequence for phylogenetic analyses along with 101 other nematode species. Phylogenetic analyses using amino acid and nucleotide sequence data of 12 protein-coding genes strongly support a sister relationship between the two cephalobomorpha species A. varius and Acrobeles complexus (represented by a partial mt genome sequence). In this mitochondrial genome phylogeny, Cephalobomorpha was sister to all chromadorean species (excluding Plectus acuminatus of Plectida) and separated from Panagrolaimomorpha and Tylenchomorpha, rendering Tylenchina non-monophyletic. Mitochondrial gene order among Tylenchina species is not conserved, and gene clusters shared between A. varius and A. complexus are very limited. Results from phylogenetic analysis and gene order comparison confirms Tylenchina is not monophyletic. To better understand phylogenetic relationships among Tylenchina members, additional mitochondrial genome information is needed from underrepresented taxa representing Panagrolaimomorpha and Cephalobomorpha.
机译:Infraorder Cephalobomorpha是几乎所有陆地环境中的多种和生态的重要线虫组。在基于SSU RDNA的最近线虫分类系统中,Cephalobomorpha在亚哥拉大鼠,Tylenchomorpha和Drilonematomorpha分类。然而,Tylenchina内物种之间的系统发育关系并不总是一致的,并且头孢菌菌的系统发育位置仍然不确定。在该研究中,为了与其他线虫组进行头孢汞的系统发育关系,我们确定了杂色的线粒体基因组序列,其奇偶骨瓣差异,首屈一指的表达,并利用该序列进行系统发育分析以及101种其他线虫物种。使用12蛋白编码基因的氨基酸和核苷酸序列数据的系统发育分析强烈支持两种头孢菌菌属A.瓦里斯和杂技复合物(由部分MT基因组序列表示)之间的姐妹关系。在这种线粒体基因组系统中,Cephalobomorpha是所有染色体物种的姐妹(不包括Plectida的Plentus AcuminAtus)并与Panagroleaimomorpha和Tylenchomorpha分离,呈现Tylenchina非单型。 Tylenchina物种中的线粒体基因令不保守,并且在A.Varius和A.Crextus之间共享的基因簇非常有限。系统发育分析和基因订单比较的结果证实Tylenchina不是单噬细胞。为了更好地了解Tylenchina成员之间的系统发育关系,来自代表PanagroloLaimorpha和Cephalobomorpha的不足的分类卡属需要额外的线粒体基因组信息。

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