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Chitin Accelerates Activation of a Novel Haloarchaeal Serine Protease That Deproteinizes Chitin-Containing Biomass

机译:几丁质加速激活一种新型盐古菌丝氨酸蛋白酶,使含几丁质的生物质脱蛋白

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摘要

The haloarchaeon Natrinema sp. strain J7-2 has the ability to degrade chitin, and its genome harbors a chitin metabolism-related gene cluster that contains a halolysin gene, sptC. The sptC gene encodes a precursor composed of a signal peptide, an N-terminal propeptide consisting of a core domain (N-star) and a linker peptide, a subtilisin-like catalytic domain, a polycystic kidney disease domain (PkdD), and a chitin-binding domain (ChBD). Here we report that the autocatalytic maturation of SptC is initiated by cis-processing of N-star to yield an autoprocessed complex (N-star-I-WT), followed by trans-processing/degradation of the linker peptide, the ChBD, and N-star. The resulting mature form (M-WT) containing the catalytic domain and the PkdD showed optimum azocaseinolytic activity at 3 to 3.5 M NaCl, demonstrating salt-dependent stability. Deletion analysis revealed that the PkdD did not confer extra stability on the enzyme but did contribute to enzymatic activity. The ChBD exhibited salt-dependent chitinbinding capacity and mediated the binding of N-star-I-WT to chitin. ChBD-mediated chitin binding enhances SptC maturation by promoting activation of the autoprocessed complex. Our results also demonstrate that SptC is capable of removing proteins from shrimp shell powder (SSP) at high salt concentrations. Interestingly, N-star-I-WT released soluble peptides from SSP faster than did M-WT. Most likely, ChBD-mediated binding of the autoprocessed complex to chitin in SSP not only accelerates enzyme activation but also facilitates the deproteinization process by increasing the local protease concentration around the substrate. By virtue of these properties, SptC is highly attractive for use in preparation of chitin from chitin-containing biomass.
机译:卤古菌 Natrinema sp. 菌株 J7-2 具有降解几丁质的能力,其基因组包含一个包含卤素溶解素基因 sptC 的几丁质代谢相关基因簇。sptC 基因编码由信号肽组成的前体、由核心结构域 (N-star) 和连接肽组成的 N 端前肽、枯草杆菌蛋白酶样催化结构域、多囊肾病结构域 (PkdD) 和几丁质结合结构域 (ChBD)。在这里,我们报告了SptC的自催化成熟是通过N-star的顺式加工启动的,以产生自动处理的复合物(N-star-I-WT),然后是连接肽,ChBD和N-star的反式处理/降解。所得的成熟形式 (M-WT) 含有催化结构域和 PkdD 在 3 至 3.5 M NaCl 下显示出最佳的偶氮酪蛋白溶解活性,显示出盐依赖性稳定性。缺失分析表明,PkdD不会赋予酶额外的稳定性,但确实有助于酶活性。ChBD表现出盐依赖性几丁质结合能力,并介导N-star-I-WT与几丁质的结合。ChBD 介导的几丁质结合通过促进自动加工复合物的激活来增强 SptC 成熟。我们的结果还表明,SptC能够在高盐浓度下从虾壳粉(SSP)中去除蛋白质。有趣的是,N-star-I-WT比M-WT更快地从SSP释放可溶性肽。最有可能的是,ChBD 介导的自加工复合物与 SSP 中几丁质的结合不仅加速酶活化,而且还通过增加底物周围的局部蛋白酶浓度来促进脱蛋白过程。凭借这些特性,SptC在从含几丁质的生物质制备甲壳素方面具有很高的吸引力。

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