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Actin gene family evolution and the phylogeny of coleoid cephalopods(Mollusca : Cephalopoda)

机译:肌动蛋白基因家族进化与鞘类头足类动物(软体动物:头足纲)的系统发育

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摘要

Phylogenetic analysis conducted on a 784-bp fragment of 82 actin gene sequences of 44 coleoid cephalopod taxa, along with results obtained from genomic Southern blot analysis, confirmed the presence of at least three distinct actin loci in coleoids. Actin isoforms were characterized through phylogenetic analysis of representative cephalopod sequences from each of the three isoforms, along with translated actin cDNA sequences from a diverse array of metazoan taxa downloaded from GenBank. One of the three isoforms found in cephalopods was closely related to actin sequences expressed in the muscular tissues of other molluscs. A second isoform was most similar to cytoplasmic-specific actin amino acid sequences. The muscle type actins of molluscs were found to be distinct from those of arthropods, suggesting at least two independent derivations of muscle actins in the protostome lineage, although statistical support for this conclusion was lacking. Parsimony and maximum-likelihood analyses of two of the isoforms from which >30 orthologous coleoid sequences had been obtained (one of the cytoplasmic actins and the muscle actin) supported the monophyly of several higher-level coleoid taxa. These included the superorders Octopodiformes and Decapodiformes, the order Octopoda, the octopod suborder Incirrata, and the teuthoid suborder Myopsida. The monophyly of several taxonomic groups within the Decapodiformes was not supported, including the orders Teuthoidea and Sepioidea and the teuthoid suborder Oegopsida. Parametric bootstrap analysis conducted on the simulated cytoplasmic actin data set provided statistical support to reject the monophyly of the Sepioidea. Although parametric bootstrap analysis of the muscle actin isoform did not reject sepioid monophyly at the 5 level, the results (rejection at P = 0.068) were certainly suggestive of sepioid nonmonophyly.
机译:对 44 个鞘状头足类群的 82 个肌动蛋白基因序列的 784 bp 片段进行的系统发育分析,以及基因组 Southern 印迹分析的结果,证实了类鞘中至少存在三个不同的肌动蛋白位点。通过对来自三种亚型中每个亚型的代表性头足类序列的系统发育分析,以及从GenBank下载的各种后生动物分类群的翻译肌动蛋白cDNA序列来表征肌动蛋白亚型。在头足类动物中发现的三种亚型之一与其他软体动物肌肉组织中表达的肌动蛋白序列密切相关。第二种亚型与细胞质特异性肌动蛋白氨基酸序列最相似。发现软体动物的肌肉类型肌动蛋白与节肢动物的肌动蛋白不同,这表明在原口谱系中至少有两个独立的肌肉肌动蛋白衍生物,尽管缺乏对这一结论的统计支持。对获得 >30 个直系同源鞘样序列的两种亚型(细胞质肌动蛋白和肌肉肌动蛋白之一)的简化和最大似然分析支持了几个更高层次的鞘状分类群的单系性。这些包括超目Octopodiformes和Decapodiformes,Octopoda目,Octopoda亚目Incirrata和teuthoid亚目Myopsida。不支持十足形目中几个分类群的单系,包括 Teuthoidea 和 Sepioidea 目以及 teuthoid 亚目 Oegopsida。在模拟的细胞质肌动蛋白数据集上进行的参数引导分析为拒绝 Sepioidea 的单系提供了统计学支持。尽管肌肉肌动蛋白亚型的参数引导分析在 5% 水平上没有排斥类外囊单系,但结果(在 P = 0.068 时排斥)肯定提示类旁观单系。

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