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Disorder-Order Interplay of a Barnacle Cement Protein Triggered by Interactions with Calcium and Carbonate Ions: A Molecular Dynamics Study

机译:与钙离子和碳酸根离子相互作用触发的藤壶水泥蛋白的无序相互作用:分子动力学研究

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摘要

Barnacles strongly adhere to immersed solid substrates using a mixture of cement proteins (CP) that self-assembles into a permanently bonded layer and binds the barnacles' shells to foreign surfaces. MrCP20 from Megabalanus rosa has been identified as a putative interfacial CP; however, its functional role remains uncertain. Since the barnacle shell is primarily composed of calcite, we carry out molecular dynamics simulations to investigate the molecular interactions between MrCP20 and calcium carbonate (in free ionic form and as calcite surface). We find that MrCP20 sequesters free Ca2+ and CO32- ions on its highly charged surface through disorderorder interplay of the protein and ions. A similar ordering is seen in the protein conformational landscape upon interactions with the calcite surface. Structural examinations indicate that the energetically favorable interactions with calcium carbonate are mediated by charged functional groups that flank the structured regions of MrCP20 and networks of water molecules. In vitro biomineralization experiments and X-ray diffraction indicate that MrCP20 favors the precipitation of the less stable vaterite polymorph of CaCO3. Our study suggests that the barnacles exploit the semi-(dis)ordered nature of acidic MrCP20 to adhere to surfaces like calcite, thereby regulating nucleation, growth, or morphology of the mineral, while simultaneously interacting with other biomolecules in cement.
机译:藤壶使用水泥蛋白 (CP) 的混合物牢固地粘附在浸入的固体基质上,这些水泥蛋白 (CP) 自组装成永久粘合层并将藤壶的外壳与异物表面结合。来自 Megabalanus rosa 的 MrCP20 已被确定为推定的界面 CP;然而,其功能作用仍不确定。由于藤壶壳主要由方解石组成,我们进行了分子动力学模拟,以研究MrCP20与碳酸钙(游离离子形式和方解石表面)之间的分子相互作用。我们发现 MrCP20 通过蛋白质和离子的无序相互作用在其高电荷表面上隔离游离 Ca2+ 和 CO32- 离子。在与方解石表面相互作用时,在蛋白质构象景观中也观察到类似的顺序。结构检查表明,与碳酸钙的能量有利相互作用是由带电官能团介导的,这些官能团位于MrCP20的结构化区域和水分子网络的两侧。体外生物矿化实验和X射线衍射表明,MrCP20有利于CaCO3不稳定球霰石晶型的析出。我们的研究表明,藤壶利用酸性MrCP20的半(无序)性质粘附在方解石等表面,从而调节矿物的成核、生长或形态,同时与水泥中的其他生物分子相互作用。

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