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Mutation profiling of circulating tumor DNA identifies distinct mutation patterns in non‐Hodgkin lymphoma

机译:循环肿瘤 DNA 的突变谱可识别非霍奇金淋巴瘤的不同突变模式

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Abstract Objective Circulating tumor DNA (ctDNA) is emerging as a versatile biomarker for noninvasive genotyping and response monitoring in specific B‐cell lymphomas; however, few studies have been conducted to explore ctDNA‐based mutation profiling across non‐Hodgkin lymphomas (NHLs) and genomic changes after initiation of chemotherapy. Methods A targeted sequencing of 362?genes was performed to detect the mutation profiles in paired blood and tissue samples from 42?NHL patients. Genomic alterations were explored in 11 diffuse large B‐cell lymphoma (DLBCL) patients using paired blood samples collected pre‐ and post‐R‐CHOP chemotherapy. Results The frequencies of PIM1, MYD88, MYC, ZNF292, JAK, and MAF mutations were higher in aggressive than in indolent B‐cell lymphoma and NK/T subtypes. Tumor mutation burden in blood samples was higher in aggressive than in indolent B‐cell lymphomas and higher in patients who progressed than in those who responded to treatments. Our data also revealed significant enhance of concordance index through integrating mutated genes that were significantly associated with prognosis into International Prognostic Index‐based prognostic model. Moreover, acquisition of mutations such as PCLO_p.L1220Tfs*3 was associated with resistance to R‐CHOP in DLBCL patients. Conclusions Our findings illustrated distinct mutation patterns across various NHL subtypes and suggested the association of genomic alterations in ctDNA with treatment outcomes.
机译:摘要 目的 循环肿瘤DNA(ctDNA)正在成为一种多功能的生物标志物,用于特异性B细胞淋巴瘤的无创基因分型和反应监测;然而,很少有研究来探索非霍奇金淋巴瘤 (NHL) 中基于 ctDNA 的突变谱和化疗开始后的基因组变化。方法 对362个基因进行靶向测序,检测42个基因的配对血液和组织样本的突变谱。非霍奇金霍金杆菌患者。使用 R-CHOP 化疗前后收集的配对血样,探索了 11 名弥漫性大 B 细胞淋巴瘤 (DLBCL) 患者的基因组改变。结果 侵袭性PIM1、MYD88、MYC、ZNF292、JAK和MAF突变的频率高于惰性B细胞淋巴瘤和NK/T亚型。侵袭性B细胞淋巴瘤患者血液样本中的肿瘤突变负荷高于惰性B细胞淋巴瘤患者,进展患者高于治疗反应患者。我们的数据还显示,通过将与预后显著相关的突变基因整合到基于国际预后指数的预后模型中,一致性指数显着增强。此外,PCLO_p.L1220Tfs*3 等突变的获得与 DLBCL 患者对 R-CHOP 的耐药性相关。结论 我们的研究结果说明了各种NHL亚型的不同突变模式,并表明ctDNA基因组改变与治疗结果的关联。

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